RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 XPO4Q9C0E2 1151 aaKnown RBP9.38□□□□□ -0.91
CPNE4-211ENST00000514439 HSD3B7Q9H2F3 369 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 IFNKQ9P0W0 207 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
CPNE4-211ENST00000514439 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 GPR75-ASB3A0A0A6YYF3 556 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 KLRG2A4D1S0 409 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-211ENST00000514439 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
CPNE4-211ENST00000514439 NEMFO60524 1076 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 BMP15O95972 392 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 BMP6P22004 513 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 LMOD1P29536 600 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-211ENST00000514439 NLRP5P59047 1200 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 MYL5Q02045 173 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 TTC38Q5R3I4 469 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
CPNE4-211ENST00000514439 C6orf229H3BNL8 230 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 ATP1A3P13637 1013 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 RASA1P20936 1047 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 GRM4Q14833 912 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 ZNF174Q15697 407 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 TXNRD1Q16881 649 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 CCDC178Q5BJE1 867 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 OLFM4Q6UX06 510 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 TEX11Q8IYF3 940 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 GRAMD1CQ8IYS0 662 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 ZNF444Q8N0Y2 327 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-211ENST00000514439 PROM2Q8N271 834 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 TCP11L1Q9NUJ3 509 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 MAN1B1Q9UKM7 699 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 SNED1Q8TER0 1413 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 FLT1P17948 1338 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 A0A087X0B3 334 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-211ENST00000514439 ADAMTS3O15072 1205 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 FANCCQ00597 558 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 NT5DC1Q5TFE4 455 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 PIK3AP1Q6ZUJ8 805 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 MYRIPQ8NFW9 859 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 TBC1D22AQ8WUA7 517 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 FERMT2Q96AC1 680 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 EPSTI1Q96J88 318 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 OSBPL5Q9H0X9 879 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-211ENST00000514439 MAD2L2Q9UI95 211 aa9.37□□□□□ -0.91
CPNE4-211ENST00000514439 BAZ2BQ9UIF8 2168 aaKnown RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 GAKO14976 1311 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 PLCG2P16885 1265 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SARSP49591 514 aaKnown RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 GSDMDP57764 484 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 RHBDL3P58872 404 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 CCZ1BP86790 482 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 ATP2C1P98194 919 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SYMPKQ92797 1274 aaKnown RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SMARCE1Q969G3 411 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 FAM163AQ96GL9 167 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 TMEM47Q9BQJ4 181 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 IMPACTQ9P2X3 320 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 LTBP1Q14766 1721 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 DDX60LQ5H9U9 1706 aaKnown RBP9.36□□□□□ -0.91
CPNE4-211ENST00000514439 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 BRWD3Q6RI45 1802 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SKILP12757 684 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 TRAPPC10P48553 1259 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 CDK8P49336 464 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 GNAQP50148 359 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 PTGDRQ13258 359 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 MORC3Q14149 939 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 ZNF827Q17R98 1081 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 TMC6Q7Z403 805 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 TMC4Q7Z404 712 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SLF2Q8IX21 1173 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 SP8Q8IXZ3 490 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 DHX58Q96C10 678 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 MTMR7Q9Y216 660 aa9.36□□□□□ -0.91
CPNE4-211ENST00000514439 VWA3AA6NCI4 1184 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 CALML3P27482 149 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 SAMD1Q6SPF0 538 aaPredicted RBP9.35□□□□□ -0.91
CPNE4-211ENST00000514439 BLIDQ8IZY5 108 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 SPATA20Q8TB22 786 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 C16orf45Q96MC5 204 aaPredicted RBP9.35□□□□□ -0.91
CPNE4-211ENST00000514439 EYA3Q99504 573 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 SH3GLB2Q9NR46 395 aa9.35□□□□□ -0.91
CPNE4-211ENST00000514439 CDK5RAP2Q96SN8 1893 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 CYTH3O43739 400 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 SLFN14P0C7P3 912 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 MCM7P33993 719 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms