RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MKL1Q969V6 931 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 ERO1AQ96HE7 468 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 P2RX7Q99572 595 aaKnown RBP9.83□□□□□ -0.84
CCL28-204ENST00000514421 IL25Q9H293 177 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 RNF41Q9H4P4 317 aaPredicted RBP9.83□□□□□ -0.84
CCL28-204ENST00000514421 NYAP2Q9P242 653 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 CLIP2Q9UDT6 1046 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 CPA4Q9UI42 421 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCL28-204ENST00000514421 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 MYH7P12883 1935 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 IGKV6D-41A0A0C4DH26 115 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 GCLCP48506 637 aaPredicted RBP9.82□□□□□ -0.84
CCL28-204ENST00000514421 NT5C2P49902 561 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 IRX3P78415 501 aaPredicted RBP9.82□□□□□ -0.84
CCL28-204ENST00000514421 KIF22Q14807 665 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 ZYXQ15942 572 aaKnown RBP9.82□□□□□ -0.84
CCL28-204ENST00000514421 IMMTQ16891 758 aaKnown RBP9.82□□□□□ -0.84
CCL28-204ENST00000514421 CATSPERGQ6ZRH7 1159 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 SMCR8Q8TEV9 937 aaPredicted RBP9.82□□□□□ -0.84
CCL28-204ENST00000514421 LPAR1Q92633 364 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 MAP4K1Q92918 833 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 ESYT1Q9BSJ8 1104 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 ASCC2Q9H1I8 757 aaPredicted RBP9.82□□□□□ -0.84
CCL28-204ENST00000514421 VCPKMTQ9H867 229 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 TOMM22Q9NS69 142 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 HOXC10Q9NYD6 342 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 TACC3Q9Y6A5 838 aa9.82□□□□□ -0.84
CCL28-204ENST00000514421 CDK5RAP2Q96SN8 1893 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 TSPY2A6NKD2 308 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 TTLL1O95922 423 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 BCRP11274 1271 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 PTH1RQ03431 593 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 COG2Q14746 738 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 RRP12Q5JTH9 1297 aaKnown RBP9.81□□□□□ -0.84
CCL28-204ENST00000514421 CTU1Q7Z7A3 348 aaKnown RBP9.81□□□□□ -0.84
CCL28-204ENST00000514421 STAG1Q8WVM7 1258 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 GOPCQ9HD26 462 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 TCP11L1Q9NUJ3 509 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
CCL28-204ENST00000514421 FOCADQ5VW36 1801 aa9.81□□□□□ -0.84
CCL28-204ENST00000514421 SIPA1L1O43166 1804 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 F5H6K3 240 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 GNRH1P01148 92 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 VCAM1P19320 739 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 DDIT3P35638 169 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 ANAPC15P60006 121 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 HERVK_113P62684 666 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 LACTBP83111 547 aaPredicted RBP9.8□□□□□ -0.84
CCL28-204ENST00000514421 KLRC3Q07444 240 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 RABEP1Q15276 862 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 PKN2Q16513 984 aaKnown RBP9.8□□□□□ -0.84
CCL28-204ENST00000514421 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 CLEC10AQ8IUN9 316 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 CD99L2Q8TCZ2 262 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 GTF3C2Q8WUA4 911 aaPredicted RBP9.8□□□□□ -0.84
CCL28-204ENST00000514421 ESR2Q92731 530 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 CEP95Q96GE4 821 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 TTC14Q96N46 770 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 KRT23Q9C075 422 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 NBPF3Q9H094 633 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 RPAP3Q9H6T3 665 aaPredicted RBP9.8□□□□□ -0.84
CCL28-204ENST00000514421 EFCC1Q9HA90 598 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 IL17RBQ9NRM6 502 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 SYNPO2Q9UMS6 1093 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 OTOFQ9HC10 1997 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 BAZ2AQ9UIF9 1905 aaKnown RBP9.8□□□□□ -0.84
CCL28-204ENST00000514421 ADGRA2Q96PE1 1338 aa9.8□□□□□ -0.84
CCL28-204ENST00000514421 WDR46O15213 610 aaKnown RBP9.79□□□□□ -0.84
CCL28-204ENST00000514421 RAD21O60216 631 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 HOXD10P28358 340 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 NOVP48745 357 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 TRDNQ13061 729 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 FAM110CQ1W6H9 321 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 KIAA1755Q5JYT7 1200 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 TBC1D10CQ8IV04 446 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 TNS4Q8IZW8 715 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 SPICE1Q8N0Z3 855 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 ANKRD13CQ8N6S4 541 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 GPRC5AQ8NFJ5 357 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 MCOLN1Q9GZU1 580 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 LSG1Q9H089 658 aaKnown RBP9.79□□□□□ -0.84
CCL28-204ENST00000514421 CNNM2Q9H8M5 875 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 RBPJLQ9UBG7 517 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 RABGAP1Q9Y3P9 1069 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 TRIM17Q9Y577 477 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 CASP8AP2Q9UKL3 1982 aa9.79□□□□□ -0.84
CCL28-204ENST00000514421 NMT2O60551 498 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 FMNL1O95466 1100 aaPredicted RBP9.78□□□□□ -0.84
CCL28-204ENST00000514421 CYP21A2P08686 494 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 PSMC4P43686 418 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 FCGRTP55899 365 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 Q3C1V9 767 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 SLFN13Q68D06 897 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 LBX2Q6XYB7 198 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 OTOP1Q7RTM1 612 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 DGKHQ86XP1 1220 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms