RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 DCAF15Q66K64 600 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 DDX42Q86XP3 938 aaKnown RBP eCLIP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 ZNF512BQ96KM6 892 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 FAM126AQ9BYI3 521 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 MKRN2Q9H000 416 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 PIDD1Q9HB75 910 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 SSU72Q9NP77 194 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 APEX2Q9UBZ4 518 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 MAPRE3Q9UPY8 281 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 DNAJC25-GNG10A0A024R161 153 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 GSG1L2A8MUP6 293 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 PRODHO43272 600 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 PPM1BO75688 479 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 FGFR1P11362 822 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 PABPC1P11940 636 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 EXOSC10Q01780 885 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 COL9A3Q14050 684 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 WWC2Q6AWC2 1192 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 NSMFQ6X4W1 530 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 UBE3DQ7Z6J8 389 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 RNF180Q86T96 592 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 UBR7Q8N806 425 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 BVESQ8NE79 360 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 ISL2Q96A47 359 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 FOXQ1Q9C009 403 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 RNF208Q9H0X6 261 aa6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 INTS7Q9NVH2 962 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 MAGEC2Q9UBF1 373 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-222ENST00000514006 ARID4BQ4LE39 1312 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 SHISA8B8ZZ34 492 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 ALG1L2C9J202 215 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 NOP56O00567 594 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 WISP1O95388 367 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 PMLP29590 882 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 MAP7Q14244 749 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 BRDTQ58F21 947 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 CNNM4Q6P4Q7 775 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 ACAD11Q709F0 780 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 DYMQ7RTS9 669 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 LRRTM3Q86VH5 581 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 SMG8Q8ND04 991 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 XAGE3Q8WTP9 111 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 TARS2Q9BW92 718 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 LGR4Q9BXB1 951 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 SUGCTQ9HAC7 445 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 LRRC4BQ9NT99 713 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 WHRNQ9P202 907 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 SFMBT1Q9UHJ3 866 aa6.83□□□□□ -1.32
CALCOCO2-222ENST00000514006 DLL1O00548 723 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 BCRP11274 1271 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 SDSP20132 328 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 CD247P20963 164 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 RAC1P63000 192 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 SOX4Q06945 474 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 FMNL3Q8IVF7 1028 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 CRACR2BQ8N4Y2 399 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 ZNF513Q8N8E2 541 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 ZNF451Q9Y4E5 1061 aa6.82□□□□□ -1.32
CALCOCO2-222ENST00000514006 LRIG2O94898 1065 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 ITGA4P13612 1032 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 CPEP16870 476 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 GRIA2P42262 883 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 ASPAP45381 313 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 RNF4P78317 190 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 KRT76Q01546 638 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 NBPF12Q5TAG4 269 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 SMYD4Q8IYR2 804 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 FMR1NBQ8N0W7 255 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 PPM1KQ8N3J5 372 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 MFSD2AQ8NA29 543 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 ATL2Q8NHH9 583 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 SLC16A10Q8TF71 515 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 TCEAL9Q9UHQ7 104 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 AKT3Q9Y243 479 aa6.81□□□□□ -1.32
CALCOCO2-222ENST00000514006 A0A0A0MRY4 1105 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 TBX1O43435 398 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 DRD2P14416 443 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 DGKGP49619 791 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 AUHQ13825 339 aaKnown RBP6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 TRIM61Q5EBN2 209 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 ZNF787Q6DD87 383 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 FDX2Q6P4F2 183 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 ARMCX6Q7L4S7 300 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 TRIM59Q8IWR1 403 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 AHI1Q8N157 1196 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 AFAP1L2Q8N4X5 818 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 ADCY4Q8NFM4 1077 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 PPP1R13LQ8WUF5 828 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms