RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 USP14P54578 494 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L24Q0WX57 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 CHD1LQ86WJ1 897 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 PLEKHM2Q8IWE5 1019 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 RASEFQ8IZ41 740 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 EVI5LQ96CN4 794 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 CCDC17Q96LX7 622 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 FEZ1Q99689 392 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 RPAP3Q9H6T3 665 aaPredicted RBP10.46□□□□□ -0.73
HERC4-214ENST00000513996 APPP05067 770 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 ELNP15502 786 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 IFNL3Q8IZI9 196 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 GPRC5AQ8NFJ5 357 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 PORCNQ9H237 461 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 BTBD7Q9P203 1132 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 ARPP21Q9UBL0 812 aaPredicted RBP10.45□□□□□ -0.74
HERC4-214ENST00000513996 TAOK2Q9UL54 1235 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 TMX2Q9Y320 296 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 TACC3Q9Y6A5 838 aa10.45□□□□□ -0.74
HERC4-214ENST00000513996 MGAMO43451 1857 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
HERC4-214ENST00000513996 ADCY3O60266 1144 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 EEF2P13639 858 aaKnown RBP10.44□□□□□ -0.74
HERC4-214ENST00000513996 GNAT2P19087 354 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 ERVK-24P63145 666 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 ICA1Q05084 483 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 IRF5Q13568 498 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
HERC4-214ENST00000513996 VPS53Q5VIR6 699 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 AMOTL1Q8IY63 956 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 COA7Q96BR5 231 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 FAM227BQ96M60 508 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 PAGR1Q9BTK6 254 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 TMEM106CQ9BVX2 250 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 RABGAP1Q9Y3P9 1069 aa10.44□□□□□ -0.74
HERC4-214ENST00000513996 MKI67P46013 3256 aaKnown RBP10.43□□□□□ -0.74
HERC4-214ENST00000513996 A0A0D9SFI3 127 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 PRDM1O75626 825 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 CCL5P13501 91 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 PDE4AP27815 886 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 TDO2P48775 406 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 LBX2Q6XYB7 198 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 SLAIN1Q8ND83 568 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 PXYLP1Q8TE99 480 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 USP6NLQ92738 828 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 UNC93B1Q9H1C4 597 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 OSBPL3Q9H4L5 887 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 VCPKMTQ9H867 229 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 KANSL2Q9H9L4 492 aa10.43□□□□□ -0.74
HERC4-214ENST00000513996 BIN2Q9UBW5 565 aaPredicted RBP10.43□□□□□ -0.74
HERC4-214ENST00000513996 ROBO3Q96MS0 1386 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 IGKV6D-41A0A0C4DH26 115 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 INHAP05111 366 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 CYP2B6P20813 491 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 ATP2B2Q01814 1243 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 PPARAQ07869 468 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 TRIM32Q13049 653 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
HERC4-214ENST00000513996 COG2Q14746 738 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 MORN1Q5T089 497 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 ZNF589Q86UQ0 364 aaPredicted RBP10.42□□□□□ -0.74
HERC4-214ENST00000513996 GTF3C2Q8WUA4 911 aaPredicted RBP10.42□□□□□ -0.74
HERC4-214ENST00000513996 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 SHISA4Q96DD7 197 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 RNF208Q9H0X6 261 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 MKNK2Q9HBH9 465 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 BRCA2P51587 3418 aa10.42□□□□□ -0.74
HERC4-214ENST00000513996 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 ALX1Q15699 326 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 MCMDC2Q4G0Z9 681 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 FAM47AQ5JRC9 791 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 GPR142Q7Z601 462 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 PLEKHH3Q7Z736 793 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 ZNF444Q8N0Y2 327 aaPredicted RBP10.41□□□□□ -0.74
HERC4-214ENST00000513996 LPAR1Q92633 364 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 NACAP1Q9BZK3 213 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 TANGO6Q9C0B7 1094 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 NAPBQ9H115 298 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 FBXO28Q9NVF7 368 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 HOXC10Q9NYD6 342 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 NYAP2Q9P242 653 aa10.41□□□□□ -0.74
HERC4-214ENST00000513996 TNRC18O15417 2968 aaPredicted RBP10.41□□□□□ -0.74
HERC4-214ENST00000513996 PLXNB2O15031 1838 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 WDR46O15213 610 aaKnown RBP10.4□□□□□ -0.74
HERC4-214ENST00000513996 FGAP02671 866 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 GJB1P08034 283 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 SDSP20132 328 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 MAPK4P31152 587 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 GJA8P48165 433 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 UBXN2AP68543 259 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 CCL14Q16627 93 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 NEDD1Q8NHV4 660 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms