RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 MAN1B1Q9UKM7 699 aa10.89□□□□□ -0.67
VCAN-210ENST00000513960 ADAMTS2O95450 1211 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 LIFRP42702 1097 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 RNF187Q5TA31 235 aaPredicted RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 RAD9BQ6WBX8 426 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 SGMS1Q86VZ5 419 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 CMTR1Q8N1G2 835 aaKnown RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 NOA1Q8NC60 698 aaKnown RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 NOC3LQ8WTT2 800 aaKnown RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 POLD4Q9HCU8 107 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 JADE2Q9NQC1 790 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 ABCF2Q9UG63 623 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 ZEB2O60315 1214 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 MAP9Q49MG5 647 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 MIGA1Q8NAN2 632 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 RNF41Q9H4P4 317 aaPredicted RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 ANKZF1Q9H8Y5 726 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 NWD2Q9ULI1 1742 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 DISP2A7MBM2 1401 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 RDXP35241 583 aaKnown RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 WTAPQ15007 396 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 LRRC31Q6UY01 552 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 FAM76AQ8TAV0 307 aa10.88□□□□□ -0.67
VCAN-210ENST00000513960 EPB41L4AQ9HCS5 686 aaPredicted RBP10.88□□□□□ -0.67
VCAN-210ENST00000513960 LOC102724428A0A0B4J2F2 783 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 SRGAP2O75044 1071 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 SIK1P57059 783 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 STIM1Q13586 685 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 ZKSCAN3Q9BRR0 538 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 GNL3LQ9NVN8 582 aaKnown RBP10.87□□□□□ -0.67
VCAN-210ENST00000513960 IQSEC3Q9UPP2 1182 aaPredicted RBP10.87□□□□□ -0.67
VCAN-210ENST00000513960 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 LRP6O75581 1613 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 MYH7P12883 1935 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 ITGB4P16144 1822 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 CCDC196A0A1B0GTZ2 297 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 PRKAB2O43741 272 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 PPP6R2O75170 966 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 CYP7A1P22680 504 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 CDC25AP30304 524 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
VCAN-210ENST00000513960 RTN1Q16799 776 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
VCAN-210ENST00000513960 KIFC2Q96AC6 838 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 PSMB7Q99436 277 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 UBAC1Q9BSL1 405 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 INTS13Q9NVM9 706 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 TAB2Q9NYJ8 693 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 GOLGA6CA6NDK9 693 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 UBE2Q2LH0YL09 131 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 GOLGA6DP0CG33 693 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 LCORLQ8N3X6 602 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 GOLGA6AQ9NYA3 693 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 HDAC6Q9UBN7 1215 aa10.87□□□□□ -0.67
VCAN-210ENST00000513960 AKAP11Q9UKA4 1901 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 LRRIQ3A6PVS8 624 aaPredicted RBP10.86□□□□□ -0.67
VCAN-210ENST00000513960 BTBD18B2RXH4 712 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 CHRNDQ07001 517 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 FBXW10Q5XX13 1052 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 CCDC91Q7Z6B0 441 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 TADA2BQ86TJ2 420 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 NKX2-3Q8TAU0 364 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 BCAS4Q8TDM0 211 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 MYO6Q9UM54 1294 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 PSD3Q9NYI0 1048 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 MYH15Q9Y2K3 1946 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 SYNRGQ9UMZ2 1314 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 NTRK3Q16288 839 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 GIMAP7Q8NHV1 300 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
VCAN-210ENST00000513960 MYH3P11055 1940 aa10.86□□□□□ -0.67
VCAN-210ENST00000513960 RANBP6O60518 1105 aaKnown RBP10.85□□□□□ -0.67
VCAN-210ENST00000513960 ATP2C2O75185 946 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 PPFIA4O75335 1185 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 IFNAR1P17181 557 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 GUCY2CP25092 1073 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 INPP5BP32019 993 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 KRT9P35527 623 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 RRAGBQ5VZM2 374 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
VCAN-210ENST00000513960 MLKLQ8NB16 471 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 TRIM10Q9UDY6 481 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 TFR2Q9UP52 801 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 MACROD2A1Z1Q3 448 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
VCAN-210ENST00000513960 MAP2K2P36507 400 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 USP8P40818 1118 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 GNGT1P63211 74 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 GRIN1Q05586 938 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 CCDC122Q5T0U0 273 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 DIS3L2Q8IYB7 885 aaKnown RBP10.85□□□□□ -0.67
VCAN-210ENST00000513960 EEF2KMTQ96G04 330 aa10.85□□□□□ -0.67
VCAN-210ENST00000513960 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms