RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 PCDHA11Q9Y5I1 949 aa8.06□□□□□ -1.12
SSBP2-217ENST00000513785 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
SSBP2-217ENST00000513785 ZGLP1P0C6A0 271 aa8.05□□□□□ -1.12
SSBP2-217ENST00000513785 SNAP47Q5SQN1 464 aa8.05□□□□□ -1.12
SSBP2-217ENST00000513785 DIEXFQ68CQ4 756 aaKnown RBP8.05□□□□□ -1.12
SSBP2-217ENST00000513785 MRS2Q9HD23 443 aa8.05□□□□□ -1.12
SSBP2-217ENST00000513785 DCP1AQ9NPI6 582 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-217ENST00000513785 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
SSBP2-217ENST00000513785 TIGD5Q53EQ6 642 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 ANKLE2Q86XL3 938 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 CCDC74BQ96LY2 380 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 KIF2CQ99661 725 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 RNF32Q9H0A6 362 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 KBTBD4Q9NVX7 518 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 EBF1Q9UH73 591 aa8.04□□□□□ -1.12
SSBP2-217ENST00000513785 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
SSBP2-217ENST00000513785 LTKP29376 864 aa8.03□□□□□ -1.12
SSBP2-217ENST00000513785 LCNL1Q6ZST4 164 aa8.03□□□□□ -1.12
SSBP2-217ENST00000513785 REC114Q7Z4M0 266 aa8.03□□□□□ -1.12
SSBP2-217ENST00000513785 LRRC56Q8IYG6 542 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-217ENST00000513785 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
SSBP2-217ENST00000513785 TOX2Q96NM4 488 aa8.03□□□□□ -1.12
SSBP2-217ENST00000513785 EPB41L4BQ9H329 900 aa8.03□□□□□ -1.12
SSBP2-217ENST00000513785 MPP2Q14168 576 aa8.02□□□□□ -1.13
SSBP2-217ENST00000513785 FBXL19Q6PCT2 694 aa8.02□□□□□ -1.13
SSBP2-217ENST00000513785 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
SSBP2-217ENST00000513785 PHACTR4Q8IZ21 702 aa8.02□□□□□ -1.13
SSBP2-217ENST00000513785 PDZD8Q8NEN9 1154 aa8.02□□□□□ -1.13
SSBP2-217ENST00000513785 RBM47A0AV96 593 aaKnown RBP8.01□□□□□ -1.13
SSBP2-217ENST00000513785 NFIBO00712 420 aa8.01□□□□□ -1.13
SSBP2-217ENST00000513785 PWP1Q13610 501 aa8.01□□□□□ -1.13
SSBP2-217ENST00000513785 ASPNQ9BXN1 380 aa8.01□□□□□ -1.13
SSBP2-217ENST00000513785 SLC22A31A6NKX4 558 aa8□□□□□ -1.13
SSBP2-217ENST00000513785 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
SSBP2-217ENST00000513785 ETV2O00321 342 aaPredicted RBP8□□□□□ -1.13
SSBP2-217ENST00000513785 TMEM253P0C7T8 217 aa8□□□□□ -1.13
SSBP2-217ENST00000513785 TEKQ02763 1124 aa8□□□□□ -1.13
SSBP2-217ENST00000513785 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
SSBP2-217ENST00000513785 ERMP1Q7Z2K6 904 aa8□□□□□ -1.13
SSBP2-217ENST00000513785 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
SSBP2-217ENST00000513785 UBOX5O94941 541 aa7.99□□□□□ -1.13
SSBP2-217ENST00000513785 ATG14Q6ZNE5 492 aa7.99□□□□□ -1.13
SSBP2-217ENST00000513785 BRMS1Q9HCU9 246 aa7.99□□□□□ -1.13
SSBP2-217ENST00000513785 RGS13O14921 159 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 GBP1P32455 592 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 CCDC27Q2M243 656 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 ARSHQ5FYA8 562 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 OXR1Q8N573 874 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 ZSCAN18Q8TBC5 510 aaPredicted RBP7.98□□□□□ -1.13
SSBP2-217ENST00000513785 KCNN1Q92952 543 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 CD320Q9NPF0 282 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 KCNQ5Q9NR82 932 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 PCDHB14Q9Y5E9 798 aa7.98□□□□□ -1.13
SSBP2-217ENST00000513785 FITM1A5D6W6 292 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 GREM1O60565 184 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 ZSCAN22P10073 491 aaPredicted RBP7.97□□□□□ -1.13
SSBP2-217ENST00000513785 CRKP46108 304 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 GALK1P51570 392 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 NR0B2Q15466 257 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 CLEC16AQ2KHT3 1053 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 DHX38Q92620 1227 aaKnown RBP7.97□□□□□ -1.13
SSBP2-217ENST00000513785 G6PC3Q9BUM1 346 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 ZNF281Q9Y2X9 895 aa7.97□□□□□ -1.13
SSBP2-217ENST00000513785 NOTOA8MTQ0 251 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 MED14OSP0DP75 135 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 POLR2BP30876 1174 aaKnown RBP7.96□□□□□ -1.14
SSBP2-217ENST00000513785 EIF4A3P38919 411 aaKnown RBP7.96□□□□□ -1.14
SSBP2-217ENST00000513785 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.14
SSBP2-217ENST00000513785 KCNA10Q16322 511 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 CWF19L2Q2TBE0 894 aaKnown RBP7.96□□□□□ -1.14
SSBP2-217ENST00000513785 LILRA2Q8N149 483 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 USHBP1Q8N6Y0 703 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.14
SSBP2-217ENST00000513785 LINC01599Q8WXQ3 324 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 SLC26A8Q96RN1 970 aa7.96□□□□□ -1.14
SSBP2-217ENST00000513785 SMG5Q9UPR3 1016 aaKnown RBP7.96□□□□□ -1.14
SSBP2-217ENST00000513785 PSPNO60542 156 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 EFEMP2O95967 443 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 ERCC3P19447 782 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 GLDCP23378 1020 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 TMC3Q7Z5M5 1100 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 SHISA4Q96DD7 197 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 HDAC8Q9BY41 377 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
SSBP2-217ENST00000513785 YBX2Q9Y2T7 364 aaKnown RBP7.95□□□□□ -1.14
SSBP2-217ENST00000513785 MYOCOSA0A1B0GUC4 107 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 KRTAP9-7A8MTY7 169 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 ATE1O95260 518 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 RAG1P15918 1043 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 SNW1Q13573 536 aaKnown RBP7.94□□□□□ -1.14
SSBP2-217ENST00000513785 NBPF12Q5TAG4 269 aaPredicted RBP7.94□□□□□ -1.14
SSBP2-217ENST00000513785 SPPL2CQ8IUH8 684 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 SIAH1Q8IUQ4 282 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 SYTL4Q96C24 671 aaPredicted RBP7.94□□□□□ -1.14
SSBP2-217ENST00000513785 INTS4Q96HW7 963 aaKnown RBP7.94□□□□□ -1.14
SSBP2-217ENST00000513785 MCOLN1Q9GZU1 580 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 GMIPQ9P107 970 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 ADAMTS1Q9UHI8 967 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 GPR160Q9UJ42 338 aa7.94□□□□□ -1.14
SSBP2-217ENST00000513785 SUPT16HQ9Y5B9 1047 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms