RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 C2orf54Q08AI8 447 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 ENOX1Q8TC92 643 aaKnown RBP8.64□□□□□ -1.03
CLCN3-209ENST00000513761 GOLGA8KD6RF30 607 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC172P0C7W6 258 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 PICALMQ13492 652 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 KRT71Q3SY84 523 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 HOOK3Q86VS8 718 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 LPIN2Q92539 896 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 ACSBG1Q96GR2 724 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 MYCBPQ99417 103 aaPredicted RBP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 B4DLN1 442 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 C6orf229H3BNL8 230 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 RPN1P04843 607 aaKnown RBP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 CXCR5P32302 372 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 PPARAQ07869 468 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 CABP7Q86V35 215 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 NELFCDQ8IXH7 590 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 WDR24Q96S15 920 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 CHGBP05060 677 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 DNM2P50570 870 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 ASIC2Q16515 512 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 DPF2Q92785 391 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 STMN4Q9H169 189 aaPredicted RBP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 AATFQ9NY61 560 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 SAP30BPQ9UHR5 308 aaKnown RBP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 HYOU1Q9Y4L1 999 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 PCDHB6Q9Y5E3 794 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 TET3O43151 1660 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 ABCA6Q8N139 1617 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 IL2RBP14784 551 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 CASP1P29466 404 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 CDC25AP30304 524 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 ST5P78524 1137 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 RUFY4Q6ZNE9 571 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 DAAM2Q86T65 1068 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 ERMNQ8TAM6 284 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 MTRF1LQ9UGC7 380 aaKnown RBP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 TAF6LQ9Y6J9 622 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 TNKSO95271 1327 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 KLHL30Q0D2K2 578 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 RPS6KA1Q15418 735 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 UTP11Q9Y3A2 253 aaKnown RBP8.63□□□□□ -1.03
CLCN3-209ENST00000513761 LAMC1P11047 1609 aa8.63□□□□□ -1.03
CLCN3-209ENST00000513761 F8W031 263 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 H7C1D1 291 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 CTNNA1P35221 906 aaKnown RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 GUCY2DQ02846 1103 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 PLS1Q14651 629 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 PPP1R7Q15435 360 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 EFCAB13Q8IY85 973 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 EPSTI1Q96J88 318 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 YEATS2Q9ULM3 1422 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 GTPBP6O43824 516 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 PRDM4Q9UKN5 801 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 ZFYVE16Q7Z3T8 1539 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 USP6P35125 1406 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 MED23Q9ULK4 1368 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 PDE8AO60658 829 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 ADAMTS2O95450 1211 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 PPP1R2P41236 205 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 PHKA1P46020 1223 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 SFMBT2Q5VUG0 894 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 STXBP4Q6ZWJ1 553 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 GSDMAQ96QA5 445 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 TADA3O75528 432 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC84Q86UT8 332 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 NBPF5PQ86XG9 351 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC65Q8IXS2 484 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 SMARCC2Q8TAQ2 1214 aa8.62□□□□□ -1.03
CLCN3-209ENST00000513761 CDC42BPBQ9Y5S2 1711 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 KCNK3O14649 394 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SRGAP2O75044 1071 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PARP1P09874 1014 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 ARID4AP29374 1257 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PRPHP41219 470 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SLC7A5Q01650 507 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 IFT88Q13099 833 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 MTF1Q14872 753 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 GPKOWQ92917 476 aaPredicted RBP eCLIP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 LRWD1Q9UFC0 647 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SLFN14P0C7P3 912 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 CYP2C19P33261 490 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 CYP27A1Q02318 531 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SNX29Q8TEQ0 813 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PANX2Q96RD6 677 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SWAP70Q9UH65 585 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SPHKAPQ2M3C7 1700 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 QRICH2Q9H0J4 1663 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PHKG2P15735 406 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 TNIP1Q15025 636 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 INF2Q27J81 1249 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 GSPT2Q8IYD1 628 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms