RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
GYPB-215ENST00000513677 EML1O00423 815 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 DDX58O95786 925 aaKnown RBP7.42□□□□□ -1.22
GYPB-215ENST00000513677 THBS1P07996 1170 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 HOXB7P09629 217 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 KCNJ4P48050 445 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 TM4SF4P48230 202 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 CCT4P50991 539 aaKnown RBP7.42□□□□□ -1.22
GYPB-215ENST00000513677 TXNRD3Q86VQ6 643 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 GTPBP3Q969Y2 492 aaKnown RBP7.42□□□□□ -1.22
GYPB-215ENST00000513677 GMCL1Q96IK5 515 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 CLMNQ96JQ2 1002 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 CRISPLD1Q9H336 500 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 GREM2Q9H772 168 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 MAP3K2Q9Y2U5 619 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 MED23Q9ULK4 1368 aa7.42□□□□□ -1.22
GYPB-215ENST00000513677 MYH3P11055 1940 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 KLRK1P26718 216 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 RALBP1Q15311 655 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 DLGAP5Q15398 846 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 EFHC2Q5JST6 749 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 TTLL5Q6EMB2 1281 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 APOBEC3FQ8IUX4 373 aaKnown RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 C1orf216Q8TAB5 229 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 GCC1Q96CN9 775 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 METTL22Q9BUU2 404 aaPredicted RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 VEZTQ9HBM0 779 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 HCN4Q9Y3Q4 1203 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 MYBBP1AQ9BQG0 1328 aaKnown RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 ZNF609O15014 1411 aa7.41□□□□□ -1.22
GYPB-215ENST00000513677 ZNF646O15015 1829 aaPredicted RBP7.41□□□□□ -1.22
GYPB-215ENST00000513677 PI4KAP2A4QPH2 592 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 IGFBP4P22692 258 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 WEE1P30291 646 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 RBM5P52756 815 aaKnown RBP eCLIP7.4□□□□□ -1.22
GYPB-215ENST00000513677 NEXNQ0ZGT2 675 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 SWI5Q1ZZU3 235 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 CWF19L2Q2TBE0 894 aaKnown RBP7.4□□□□□ -1.22
GYPB-215ENST00000513677 HABP4Q5JVS0 413 aaKnown RBP7.4□□□□□ -1.22
GYPB-215ENST00000513677 STRIP1Q5VSL9 837 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 CCDC30Q5VVM6 783 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 OTOP1Q7RTM1 612 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 UBE3BQ7Z3V4 1068 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 PI4KAP1Q8N8J0 262 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 C8orf58Q8NAV2 365 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 TTLL11Q8NHH1 800 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 MPHOSPH8Q99549 860 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
GYPB-215ENST00000513677 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
GYPB-215ENST00000513677 COA1Q9GZY4 146 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 DEFB129Q9H1M3 183 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 BSDC1Q9NW68 430 aaPredicted RBP7.4□□□□□ -1.22
GYPB-215ENST00000513677 PCDHAC2Q9Y5I4 1007 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 ZNF804BA4D1E1 1349 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.22
GYPB-215ENST00000513677 A0A1W2PNR3 127 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 MANSC4A6NHS7 340 aaPredicted RBP7.39□□□□□ -1.23
GYPB-215ENST00000513677 SNAP23O00161 211 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
GYPB-215ENST00000513677 APAF1O14727 1248 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 WIPF1O43516 503 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 PLIN1O60240 522 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 PRMT3O60678 531 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 IGKV5-2P06315 115 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 EN2P19622 333 aaPredicted RBP7.39□□□□□ -1.23
GYPB-215ENST00000513677 GNAI1P63096 354 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 KRT76Q01546 638 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 LBRQ14739 615 aaKnown RBP7.39□□□□□ -1.23
GYPB-215ENST00000513677 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 PRIMPOLQ96LW4 560 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
GYPB-215ENST00000513677 MYO1BO43795 1136 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 TAF5LO75529 589 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 CRHR2Q13324 411 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 UBAP2LQ14157 1087 aaKnown RBP7.38□□□□□ -1.23
GYPB-215ENST00000513677 CFAP100Q494V2 611 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 RNFT1Q5M7Z0 435 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 LDLRAD1Q5T700 205 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
GYPB-215ENST00000513677 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 TSPYL6Q8N831 410 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 RHPN1Q8TCX5 695 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 TSR2Q969E8 191 aaKnown RBP7.38□□□□□ -1.23
GYPB-215ENST00000513677 ERO1AQ96HE7 468 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 CNTNAP3BQ96NU0 1288 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 TRERF1Q96PN7 1200 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 STK31Q9BXU1 1019 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 CNTNAP3Q9BZ76 1288 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 ANKRD2Q9GZV1 360 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms