RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 GPATCH2Q9NW75 528 aa9.86□□□□□ -0.83
TRAPPC11-210ENST00000513600 LRRN2O75325 713 aa9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 GPRASP2Q96D09 838 aa9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 ANTXR1Q9H6X2 564 aa9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 CARS2Q9HA77 564 aaKnown RBP9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 RC3H2Q9HBD1 1191 aaKnown RBP9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 ADAMTS6Q9UKP5 1117 aa9.85□□□□□ -0.83
TRAPPC11-210ENST00000513600 RBAK-RBAKDNI3L0D1 243 aa9.84□□□□□ -0.83
TRAPPC11-210ENST00000513600 TNFRSF10CO14798 259 aa9.84□□□□□ -0.83
TRAPPC11-210ENST00000513600 SRFP11831 508 aa9.84□□□□□ -0.83
TRAPPC11-210ENST00000513600 POLR2BP30876 1174 aaKnown RBP9.84□□□□□ -0.83
TRAPPC11-210ENST00000513600 RASGRP4Q8TDF6 673 aa9.84□□□□□ -0.83
TRAPPC11-210ENST00000513600 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
TRAPPC11-210ENST00000513600 BIN1O00499 593 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 CLEC3AO75596 197 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 JUNBP17275 347 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 TPP2P29144 1249 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 FBXW10Q5XX13 1052 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 RBBP8NLQ8NC74 664 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 LRRN4CLQ8ND94 238 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 ZNF428Q96B54 188 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 PRDM7Q9NQW5 492 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 GINM1Q9NU53 330 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 PPT2Q9UMR5 302 aa9.82□□□□□ -0.84
TRAPPC11-210ENST00000513600 ITGB5P18084 799 aa9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 GJA8P48165 433 aa9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 SOX9P48436 509 aa9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 NBPF12Q5TAG4 269 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 ATG4DQ86TL0 474 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 TSPYL5Q86VY4 417 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 TAB3Q8N5C8 712 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 TM9SF2Q99805 663 aa9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 ASCC2Q9H1I8 757 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 CCSER2Q9H7U1 834 aa9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 EFR3BQ9Y2G0 817 aa9.81□□□□□ -0.84
TRAPPC11-210ENST00000513600 ESR1P03372 595 aa9.8□□□□□ -0.84
TRAPPC11-210ENST00000513600 RBM25P49756 843 aaKnown RBP9.8□□□□□ -0.84
TRAPPC11-210ENST00000513600 GAB4Q2WGN9 574 aa9.8□□□□□ -0.84
TRAPPC11-210ENST00000513600 CREG2Q8IUH2 290 aa9.8□□□□□ -0.84
TRAPPC11-210ENST00000513600 CCDC120Q96HB5 630 aa9.8□□□□□ -0.84
TRAPPC11-210ENST00000513600 SLC9A7Q96T83 725 aa9.8□□□□□ -0.84
TRAPPC11-210ENST00000513600 WASH4PA8MWX3 477 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 PAX4O43316 350 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 TCF3P15923 654 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 ENOX1Q8TC92 643 aaKnown RBP9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 DHRS1Q96LJ7 313 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 ACBD3Q9H3P7 528 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 DUSP13Q9UII6 198 aa9.79□□□□□ -0.84
TRAPPC11-210ENST00000513600 CLEC16AQ2KHT3 1053 aa9.78□□□□□ -0.84
TRAPPC11-210ENST00000513600 NBPF9Q3BBW0 867 aa9.78□□□□□ -0.84
TRAPPC11-210ENST00000513600 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
TRAPPC11-210ENST00000513600 ASIC4Q96FT7 647 aa9.78□□□□□ -0.84
TRAPPC11-210ENST00000513600 SLC6A18Q96N87 628 aa9.78□□□□□ -0.84
TRAPPC11-210ENST00000513600 INPP5FQ9Y2H2 1132 aa9.78□□□□□ -0.84
TRAPPC11-210ENST00000513600 ACRP10323 421 aa9.77□□□□□ -0.85
TRAPPC11-210ENST00000513600 ERCC5P28715 1186 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC11-210ENST00000513600 NMIQ13287 307 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC11-210ENST00000513600 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
TRAPPC11-210ENST00000513600 ALPK1Q96QP1 1244 aa9.77□□□□□ -0.85
TRAPPC11-210ENST00000513600 CTNND2Q9UQB3 1225 aa9.77□□□□□ -0.85
TRAPPC11-210ENST00000513600 SEC16BQ96JE7 1060 aa9.76□□□□□ -0.85
TRAPPC11-210ENST00000513600 SUCOQ9UBS9 1254 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-210ENST00000513600 SHISA3A0PJX4 238 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 PAPLNO95428 1278 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 GUCY2CP25092 1073 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 LTKP29376 864 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 EIF6P56537 245 aaKnown RBP9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 CCDC81Q6ZN84 652 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 LSRQ86X29 649 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 OR6P1Q8NGX9 317 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 SYTL5Q8TDW5 730 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 ZNF512BQ96KM6 892 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 SRRTQ9BXP5 876 aaKnown RBP9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 MKRN2Q9H000 416 aaKnown RBP9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 SLAMF8Q9P0V8 285 aa9.75□□□□□ -0.85
TRAPPC11-210ENST00000513600 GDNFP39905 211 aa9.74□□□□□ -0.85
TRAPPC11-210ENST00000513600 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC11-210ENST00000513600 EGR3Q06889 387 aa9.74□□□□□ -0.85
TRAPPC11-210ENST00000513600 FAM86C2PA6NEL3 165 aa9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 AFMP43652 599 aa9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 GIPRP48546 466 aa9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 PMS1P54277 932 aaKnown RBP9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 DAGLBQ8NCG7 672 aa9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 SYTL4Q96C24 671 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 HDAC8Q9BY41 377 aa9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 PCDHA11Q9Y5I1 949 aa9.73□□□□□ -0.85
TRAPPC11-210ENST00000513600 UNC5AQ6ZN44 842 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 RUFY4Q6ZNE9 571 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 TMC3Q7Z5M5 1100 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 ZNF655Q8N720 491 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 CPLX3Q8WVH0 158 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 PRDM14Q9GZV8 571 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 TMEM59LQ9UK28 342 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 STRIP2Q9ULQ0 834 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 PCDHB12Q9Y5F1 795 aa9.72□□□□□ -0.85
TRAPPC11-210ENST00000513600 DNAJC25-GNG10A0A024R161 153 aa9.71□□□□□ -0.86
TRAPPC11-210ENST00000513600 E9PSI1 815 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms