RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SLC10A4Q96EP9 437 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 CLMNQ96JQ2 1002 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 BACH2Q9BYV9 841 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 KANSL2Q9H9L4 492 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 ELP3Q9H9T3 547 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 A0A0G2JMZ2 1700 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 IGKV6D-41A0A0C4DH26 115 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 KDM4AO75164 1064 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 GUCY1A2P33402 732 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 ECE1P42892 770 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 ZNF157P51786 506 aaPredicted RBP8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 ANAPC15P60006 121 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 JAG1P78504 1218 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 TFAP4Q01664 338 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 ICA1Q05084 483 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 PPIL2Q13356 520 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 SEPT2Q15019 361 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 RAB3GAP1Q15042 981 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 SHROOM1Q2M3G4 852 aaPredicted RBP8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 DEFB115Q30KQ5 88 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 CCDC178Q5BJE1 867 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 FAM47AQ5JRC9 791 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 OPTNQ96CV9 577 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 WNK4Q96J92 1243 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 ARHGEF10LQ9HCE6 1279 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 INCENPQ9NQS7 918 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 TAF6LQ9Y6J9 622 aa8.94□□□□□ -0.98
HMGXB3-204ENST00000513318 IRF6O14896 467 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 HMGB1P09429 215 aaKnown RBP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 PSMA5P28066 241 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 MCM5P33992 734 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 SART3Q15020 963 aaKnown RBP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 ADCK5Q3MIX3 580 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 CLEC10AQ8IUN9 316 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 MB21D2Q8IYB1 491 aaPredicted RBP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 ZNF280CQ8ND82 737 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 IL17RAQ96F46 866 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 CEP95Q96GE4 821 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 NEK1Q96PY6 1258 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 FEZ1Q99689 392 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 UBAC1Q9BSL1 405 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 MTA3Q9BTC8 594 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 SH2D4AQ9H788 454 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 NYAP2Q9P242 653 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 SYNPO2Q9UMS6 1093 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 AFG3L2Q9Y4W6 797 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 ZHX2Q9Y6X8 837 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 RBBP6Q7Z6E9 1792 aaKnown RBP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 ZNFX1Q9P2E3 1918 aaKnown RBP8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 SMCHD1A6NHR9 2005 aa8.93□□□□□ -0.98
HMGXB3-204ENST00000513318 DOCK3Q8IZD9 2030 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 TNKSO95271 1327 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 WDR19Q8NEZ3 1342 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 ERICH2A1L162 156 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 C19orf81C9J6K1 198 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 CXCL11O14625 94 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 TTLL1O95922 423 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 EEF2P13639 858 aaKnown RBP8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 GJA5P36382 358 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 RBM25P49756 843 aaKnown RBP8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 SPP2Q13103 211 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 NOGQ13253 232 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 SNAPC2Q13487 334 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 CYP4F22Q6NT55 531 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 BLOC1S2Q6QNY1 142 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 CYB5R4Q7L1T6 521 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 CCDC84Q86UT8 332 aaPredicted RBP8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 TMEM87BQ96K49 555 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 CAPNS2Q96L46 248 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 JAKMIP1Q96N16 626 aaKnown RBP8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 ZSCAN10Q96SZ4 725 aaPredicted RBP8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 C22orf23Q9BZE7 217 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 TM6SF1Q9BZW5 370 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 IL17RBQ9NRM6 502 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 MTMR4Q9NYA4 1195 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 ZSWIM5Q9P217 1185 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 STX8Q9UNK0 236 aa8.92□□□□□ -0.98
HMGXB3-204ENST00000513318 WDR33Q9C0J8 1336 aaKnown RBP8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 A0A0G2JLL6 359 aaPredicted RBP8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 MANSC4A6NHS7 340 aaPredicted RBP8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 TRIM75PA6NK02 468 aa8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 IFIT3O14879 490 aaKnown RBP8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 PRC1O43663 620 aa8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 NMT2O60551 498 aa8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 CASTP20810 708 aaKnown RBP8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 NOVP48745 357 aa8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 GTF2A2P52657 109 aa8.91□□□□□ -0.98
HMGXB3-204ENST00000513318 USP14P54578 494 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms