RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ALPK3Q96L96 1907 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 A0A1W2PRG0 241 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 PATL2C9JE40 543 aaKnown RBP7.76□□□□□ -1.17
KDM3B-208ENST00000512928 PRDM1O75626 825 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 SLC3A2P08195 630 aaKnown RBP7.76□□□□□ -1.17
KDM3B-208ENST00000512928 CCL5P13501 91 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ERVK-9P63128 1117 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ERVK-24P63145 666 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 PLS1Q14651 629 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 MTFR1Q15390 333 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ZMYM1Q5SVZ6 1142 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ERICH6BQ5W0A0 696 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 GIMAP6Q6P9H5 292 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 SMC5Q8IY18 1101 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 IFNL3Q8IZI9 196 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ZNF444Q8N0Y2 327 aaPredicted RBP7.76□□□□□ -1.17
KDM3B-208ENST00000512928 SLAIN1Q8ND83 568 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 GTF3C2Q8WUA4 911 aaPredicted RBP7.76□□□□□ -1.17
KDM3B-208ENST00000512928 SHISA4Q96DD7 197 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 C12orf42Q96LP6 360 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 CCDC17Q96LX7 622 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ZNF287Q9HBT7 754 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 TXNRD2Q9NNW7 524 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 MORF4L1Q9UBU8 362 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 ISY1Q9ULR0 285 aaKnown RBP7.76□□□□□ -1.17
KDM3B-208ENST00000512928 MGAMO43451 1857 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 SALL3Q9BXA9 1300 aa7.76□□□□□ -1.17
KDM3B-208ENST00000512928 H0YGN5 161 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 FLOT1O75955 427 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 INHAP05111 366 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 EEF2P13639 858 aaKnown RBP7.75□□□□□ -1.17
KDM3B-208ENST00000512928 CYP2B6P20813 491 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 MAPK4P31152 587 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 CCNA1P78396 465 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 NUCB1Q02818 461 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 PDE4BQ07343 736 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 SBK1Q52WX2 424 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 CATSPERGQ6ZRH7 1159 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 RNF208Q9H0X6 261 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 PORCNQ9H237 461 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 KANSL2Q9H9L4 492 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 GOPCQ9HD26 462 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 TOMM22Q9NS69 142 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 RBPJLQ9UBG7 517 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 STAP2Q9UGK3 403 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 TMX2Q9Y320 296 aa7.75□□□□□ -1.17
KDM3B-208ENST00000512928 ROBO3Q96MS0 1386 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 A0A0D9SFI3 127 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 SPDYE16A6NNV3 312 aaPredicted RBP7.74□□□□□ -1.17
KDM3B-208ENST00000512928 TSPY3P0CV98 308 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 TSPY8P0CW00 308 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 RASA1P20936 1047 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 PPARAQ07869 468 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 NMIQ13287 307 aaPredicted RBP7.74□□□□□ -1.17
KDM3B-208ENST00000512928 COG2Q14746 738 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 Q3C1V9 767 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 FAM47AQ5JRC9 791 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 KIAA1755Q5JYT7 1200 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 FAM83BQ5T0W9 1011 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 VPS53Q5VIR6 699 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 GPR142Q7Z601 462 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 PLEKHH3Q7Z736 793 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 SOCS4Q8WXH5 440 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 LPAR1Q92633 364 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 CHMP4CQ96CF2 233 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 FAM227BQ96M60 508 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 UNC93B1Q9H1C4 597 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 VCPKMTQ9H867 229 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 DIAPH3Q9NSV4 1193 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 HOXC10Q9NYD6 342 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 RABGAP1Q9Y3P9 1069 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 IVNS1ABPQ9Y6Y0 642 aa7.74□□□□□ -1.17
KDM3B-208ENST00000512928 TSPY2A6NKD2 308 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 WDR46O15213 610 aaKnown RBP7.73□□□□□ -1.17
KDM3B-208ENST00000512928 HMGCRP04035 888 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 ZKSCAN1P17029 563 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-208ENST00000512928 RGS2P41220 211 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 SLC4A3P48751 1232 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 CTDSPL2Q05D32 466 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 IRF5Q13568 498 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 MCMDC2Q4G0Z9 681 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 RRP12Q5JTH9 1297 aaKnown RBP7.73□□□□□ -1.17
KDM3B-208ENST00000512928 CHRDL2Q6WN34 429 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 NCAPG2Q86XI2 1143 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 SIAH1Q8IUQ4 282 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
KDM3B-208ENST00000512928 PXYLP1Q8TE99 480 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 ATG4CQ96DT6 458 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 DEFB118Q96PH6 123 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 NUP88Q99567 741 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-208ENST00000512928 HELLSQ9NRZ9 838 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 BTBD7Q9P203 1132 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 CLIP2Q9UDT6 1046 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 CTDP1Q9Y5B0 961 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-208ENST00000512928 TRIOBPQ9H2D6 2365 aa7.73□□□□□ -1.17
KDM3B-208ENST00000512928 RANBP6O60518 1105 aaKnown RBP7.72□□□□□ -1.17
KDM3B-208ENST00000512928 CNMDO75829 334 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms