RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 JAG2Q9Y219 1238 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 BOLA1Q9Y3E2 137 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 ATAD2Q6PL18 1390 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 E2F8A0AVK6 867 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 LRRC10BA6NIK2 292 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 ATP1A3P13637 1013 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 PHKG2P15735 406 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 MINDY4Q4G0A6 757 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 RILPL1Q5EBL4 403 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCDC30Q5VVM6 783 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 BNC2Q6ZN30 1099 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 MYCT1Q8N699 235 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 EXOC2Q96KP1 924 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 TPCN1Q9ULQ1 816 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 H3BRJ5 948 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 IL6STP40189 918 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 SEPHS1P49903 392 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCT2P78371 535 aaKnown RBP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 TRIM29Q14134 588 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 ASIC2Q16515 512 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 TMEM67Q5HYA8 995 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 ESYT1Q9BSJ8 1104 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 NT5C1AQ9BXI3 368 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 PCGF6Q9BYE7 350 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 CRTAC1Q9NQ79 661 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 IFT80Q9P2H3 777 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 FOXD3Q9UJU5 478 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 MAGI1Q96QZ7 1491 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 VGLL3A8MV65 326 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 HNRNPCP07910 306 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 PRKG2Q13237 762 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZNF460Q14592 562 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 PARP10Q53GL7 1025 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 RNF20Q5VTR2 975 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 PPM1MQ96MI6 270 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 CAMKK2Q96RR4 588 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 DBNDD1Q9H9R9 158 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 MAN1C1Q9NR34 630 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 DIAPH3Q9NSV4 1193 aa7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 LRRFIP2Q9Y608 721 aaKnown RBP7.32□□□□□ -1.24
TRAPPC11-209ENST00000512476 A0A1B0GVC2 190 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 C9IYK1 514 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 NEMP1O14524 444 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 GJA9P57773 515 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZNF252P-AS1Q0IIN9 211 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 TBX2Q13207 712 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 HSP90AA2PQ14568 343 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 GRIN2CQ14957 1233 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 FXNQ16595 210 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 SEZ6Q53EL9 994 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 LLGL2Q6P1M3 1020 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 TEX11Q8IYF3 940 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 GOLM1Q8NBJ4 401 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 RHOVQ96L33 236 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 SGCZQ96LD1 299 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 HAUS7Q99871 368 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 NPHS2Q9NP85 383 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 TRMT1Q9NXH9 659 aaKnown RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 STAP2Q9UGK3 403 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 PNMA8BQ9ULN7 279 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 PA2G4Q9UQ80 394 aaKnown RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 CRYL1Q9Y2S2 319 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 PCDHGB6Q9Y5F9 930 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 NCAM2O15394 837 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 TLR3O15455 904 aaKnown RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 RASA4O43374 803 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 GREM1O60565 184 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 MT-CO1P00395 513 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 LPOP22079 712 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 ENPP1P22413 925 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 GIPRP48546 466 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 LRRC69Q6ZNQ3 347 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 GPR155Q7Z3F1 870 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZSWIM2Q8NEG5 633 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 NUP133Q8WUM0 1156 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 JPH4Q96JJ6 628 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 KATNAL1Q9BW62 490 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 PNMA3Q9UL41 463 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 DNM3Q9UQ16 869 aa7.31□□□□□ -1.24
TRAPPC11-209ENST00000512476 TTLL13PA6NNM8 815 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 PHF20L1A8MW92 1017 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 TLR5O60602 858 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 XPAP23025 273 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 KIF5BP33176 963 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 SCTRP47872 440 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 KRT72Q14CN4 511 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 ENOSF1Q7L5Y1 443 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 CATSPER4Q7RTX7 472 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 JAKMIP2Q96AA8 810 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 CHCHD6Q9BRQ6 235 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 RSRP1Q9BUV0 290 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 SLC13A1Q9BZW2 595 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 VPS33BQ9H267 617 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 A0A087WZG4 1122 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms