RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CDH23Q9H251 3354 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 SLC5A1P13866 664 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 CHMLP26374 656 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 CAP2P40123 477 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 PBX2P40425 430 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 ADCYAP1R1P41586 468 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 ARRDC4Q8NCT1 418 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 TRPV1Q8NER1 839 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 IPO9Q96P70 1041 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 AS3MTQ9HBK9 375 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 MUC3AQ02505 3323 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 RAD50Q92878 1312 aa12.56□□□□□ -0.4
PDLIM5-217ENST00000512274 GRXCR1A8MXD5 290 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 TBC1D12O60347 775 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 MSCO60682 206 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 TLE2Q04725 743 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 AKNAD1Q5T1N1 836 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 CCDC129Q6ZRS4 1044 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 NPLOC4Q8TAT6 608 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 HAUS7Q99871 368 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 C22orf23Q9BZE7 217 aa12.55□□□□□ -0.4
PDLIM5-217ENST00000512274 DNAH12Q6ZR08 3092 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 RAG1P15918 1043 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 HOXA7P31268 230 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 BTDP43251 543 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 TFF2Q03403 129 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 ADGRE1Q14246 886 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 MICALL1Q8N3F8 863 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 TACC3Q9Y6A5 838 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
PDLIM5-217ENST00000512274 A0A1B0GUL7 405 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 IGSF3O75054 1194 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 BMP1P13497 986 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 KCNQ1P51787 676 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 BACE1P56817 501 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 FPGSQ05932 587 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 SNX17Q15036 470 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 TMEM31Q5JXX7 168 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 DZIP1Q86YF9 867 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 RUFY2Q8WXA3 655 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 LPIN2Q92539 896 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 SNX27Q96L92 541 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 DBNDD2Q9BQY9 259 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 CCDC8Q9H0W5 538 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 GAKO14976 1311 aa12.53□□□□□ -0.4
PDLIM5-217ENST00000512274 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 SGSM2O43147 1006 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 CLTBP09497 229 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 CYBAP13498 195 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 PTPREP23469 700 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 ADORA1P30542 326 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 ANAPC15P60006 121 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 ABCF2Q9UG63 623 aa12.52□□□□□ -0.41
PDLIM5-217ENST00000512274 GBF1Q92538 1859 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 SLC15A5A6NIM6 579 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 CNMDO75829 334 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 PHKA1P46020 1223 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 JAG1P78504 1218 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 LRRC41Q15345 812 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 PRAMEF19Q5SWL8 479 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 GNL3LQ9NVN8 582 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 IVNS1ABPQ9Y6Y0 642 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
PDLIM5-217ENST00000512274 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 RHBDL3P58872 404 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 LRRFIP1Q32MZ4 808 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 CCDC158Q5M9N0 1113 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 KBTBD3Q8NAB2 608 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 SNX21Q969T3 373 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 WDR18Q9BV38 432 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 CXXC1Q9P0U4 656 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-217ENST00000512274 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 MROH7-TTC4A0A0A0MT08 1334 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 PDS5AQ29RF7 1337 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 C19orf81C9J6K1 198 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 UQCRFS1P1P0C7P4 283 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 TIMM10P62072 90 aa12.49□□□□□ -0.41
PDLIM5-217ENST00000512274 CCNA1P78396 465 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms