RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ARIH1Q9Y4X5 557 aaPredicted RBP14.2□□□□□ -0.14
RNF4-216ENST00000511859 MYH1P12882 1939 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 COG2Q14746 738 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 RAB3GAP1Q15042 981 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 PRAMEF19Q5SWL8 479 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 ABRAQ8N0Z2 381 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 TOX2Q96NM4 488 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 MOV10L1Q9BXT6 1211 aaKnown RBP14.19□□□□□ -0.14
RNF4-216ENST00000511859 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
RNF4-216ENST00000511859 NRBP1Q9UHY1 535 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 ZNF236Q9UL36 1845 aa14.19□□□□□ -0.14
RNF4-216ENST00000511859 XIRP2A4UGR9 3374 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 PLXNA1Q9UIW2 1896 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 SRGAP3O43295 1099 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 COBLO75128 1261 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 RARBP10826 455 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 CERKLQ49MI3 558 aaPredicted RBP14.18□□□□□ -0.14
RNF4-216ENST00000511859 FAM47AQ5JRC9 791 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 CCDC174Q6PII3 467 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 SPATC1LQ9H0A9 340 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 MROH8Q9H579 483 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 CABP5Q9NP86 173 aa14.18□□□□□ -0.14
RNF4-216ENST00000511859 SAP30BPQ9UHR5 308 aaKnown RBP14.18□□□□□ -0.14
RNF4-216ENST00000511859 TCF20Q9UGU0 1960 aaKnown RBP14.18□□□□□ -0.14
RNF4-216ENST00000511859 PIEZO1Q92508 2521 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 CHD9Q3L8U1 2897 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 DCDC2CA8MYV0 355 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 PQBP1O60828 265 aaKnown RBP14.17□□□□□ -0.14
RNF4-216ENST00000511859 ERCC3P19447 782 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 ABCB5Q2M3G0 1257 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 ANKRD33Q7Z3H0 272 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 CERS3Q8IU89 383 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 MB21D1Q8N884 522 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 SLC44A5Q8NCS7 719 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 ACER1Q8TDN7 264 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 MAML3Q96JK9 1138 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 EHD4Q9H223 541 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 XPNPEP3Q9NQH7 507 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 SERPINB13Q9UIV8 391 aa14.17□□□□□ -0.14
RNF4-216ENST00000511859 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 TIMP1P01033 207 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 MTX1Q13505 466 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 CCDC129Q6ZRS4 1044 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 ADGRA1Q86SQ6 560 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 TTC6Q86TZ1 520 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.16□□□□□ -0.147e-7■■■□□ 16.9
RNF4-216ENST00000511859 TSEN34Q9BSV6 310 aaKnown RBP14.16□□□□□ -0.14
RNF4-216ENST00000511859 PBX4Q9BYU1 374 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
RNF4-216ENST00000511859 PRDM12Q9H4Q4 367 aa14.16□□□□□ -0.14
RNF4-216ENST00000511859 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
RNF4-216ENST00000511859 A0A1W2PQ45 241 aaPredicted RBP14.15□□□□□ -0.14
RNF4-216ENST00000511859 A0A1W2PQY0 241 aa14.15□□□□□ -0.14
RNF4-216ENST00000511859 E9PSI1 815 aa14.15□□□□□ -0.14
RNF4-216ENST00000511859 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
RNF4-216ENST00000511859 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
RNF4-216ENST00000511859 CHD7Q9P2D1 2997 aa14.15□□□□□ -0.14
RNF4-216ENST00000511859 MYO5AQ9Y4I1 1855 aaKnown RBP14.14□□□□□ -0.15
RNF4-216ENST00000511859 SYNGAP1Q96PV0 1343 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 GNAI3P08754 354 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 FCER1AP12319 257 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 G3BP1Q13283 466 aaKnown RBP eCLIP14.14□□□□□ -0.15
RNF4-216ENST00000511859 PPIGQ13427 754 aaKnown RBP eCLIP14.14□□□□□ -0.154e-10■■□□□ 12.4
RNF4-216ENST00000511859 CCDC158Q5M9N0 1113 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 MEIS3Q99687 375 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 API5Q9BZZ5 524 aaKnown RBP14.14□□□□□ -0.15
RNF4-216ENST00000511859 SNRKQ9NRH2 765 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
RNF4-216ENST00000511859 PGK1P00558 417 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 CYP2E1P05181 493 aaPredicted RBP14.13□□□□□ -0.15
RNF4-216ENST00000511859 USP5P45974 858 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
RNF4-216ENST00000511859 TTC39AQ5SRH9 613 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 TMEM240Q5SV17 173 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 MSRAQ9UJ68 235 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 REV3LO60673 3130 aa14.13□□□□□ -0.15
RNF4-216ENST00000511859 MROH7Q68CQ1 1323 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 AKR1A1P14550 325 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 IGFBP4P22692 258 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 DSG3P32926 999 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 PBX2P40425 430 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 DYNLL1P63167 89 aaKnown RBP14.12□□□□□ -0.15
RNF4-216ENST00000511859 ADGRE1Q14246 886 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 PLS1Q14651 629 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 RAB30Q15771 203 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 AAK1Q2M2I8 961 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 C16orf59Q7L2K0 433 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 ZNF512BQ96KM6 892 aaPredicted RBP14.12□□□□□ -0.15
RNF4-216ENST00000511859 TINF2Q9BSI4 451 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 TANGO6Q9C0B7 1094 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
RNF4-216ENST00000511859 NOB1Q9ULX3 412 aaKnown RBP14.12□□□□□ -0.15
RNF4-216ENST00000511859 DIS3Q9Y2L1 958 aaKnown RBP14.12□□□□□ -0.15
RNF4-216ENST00000511859 HCN4Q9Y3Q4 1203 aa14.12□□□□□ -0.15
RNF4-216ENST00000511859 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 GRXCR1A8MXD5 290 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms