RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ASCC2Q9H1I8 757 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 MBNL3Q9NUK0 354 aaKnown RBP6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 STRIP2Q9ULQ0 834 aa6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 RNASE1P07998 156 aaKnown RBP6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 ITIH2P19823 946 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 FUT4P22083 530 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 CRKP46108 304 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 RACK1P63244 317 aaKnown RBP6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 PAK2Q13177 524 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 FBXW10Q5XX13 1052 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 CDH24Q86UP0 819 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 OR6P1Q8NGX9 317 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 RASGRP4Q8TDF6 673 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 RNF141Q8WVD5 230 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 TMEM40Q8WWA1 233 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 SEC16BQ96JE7 1060 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 DHRS1Q96LJ7 313 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 DPH2Q9BQC3 489 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 RC3H2Q9HBD1 1191 aaKnown RBP6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 CAPN10Q9HC96 672 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 SHROOM4Q9ULL8 1493 aa6.6□□□□□ -1.35
HMGB3P13-201ENST00000511263 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 BIN1O00499 593 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 RGS13O14921 159 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 AOC3Q16853 763 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 ANGEL2Q5VTE6 544 aaKnown RBP6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 NLRC3Q7RTR2 1065 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 THAP5Q7Z6K1 395 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 CPLX3Q8WVH0 158 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 FAM168AQ92567 244 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 SYTL4Q96C24 671 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 HEXIM2Q96MH2 286 aaKnown RBP6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 TM9SF2Q99805 663 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 TNKS2Q9H2K2 1166 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 ZNRF3Q9ULT6 936 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 SLC12A7Q9Y666 1083 aa6.59□□□□□ -1.35
HMGB3P13-201ENST00000511263 CLSPNQ9HAW4 1339 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 DBX1A6NMT0 343 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 MEIS3P2A8K0S8 358 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 UPK3BL1B0FP48 263 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 UPK3BL2E5RIL1 263 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 CBX7O95931 251 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 GJA8P48165 433 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 CLCQ05315 142 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 ARSHQ5FYA8 562 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 C9orf131Q5VYM1 1079 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 FAM214BQ7L5A3 538 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 ATG4DQ86TL0 474 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 LRRN4CLQ8ND94 238 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 CCDC120Q96HB5 630 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 PKNOX2Q96KN3 472 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 CNNM2Q9H8M5 875 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 GPATCH2Q9NW75 528 aa6.58□□□□□ -1.36
HMGB3P13-201ENST00000511263 OVOS1Q6IE37 1185 aa6.57□□□□□ -1.36
HMGB3P13-201ENST00000511263 TAB3Q8N5C8 712 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P13-201ENST00000511263 CLEC3AO75596 197 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 FARP2O94887 1054 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 SOX9P48436 509 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 EIF6P56537 245 aaKnown RBP6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 BBS9Q3SYG4 887 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 SPACA3Q8IXA5 215 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 RBBP8NLQ8NC74 664 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 DNAJB8Q8NHS0 232 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 ATG4CQ96DT6 458 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 KIF2CQ99661 725 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 LMCD1Q9NZU5 365 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 EFR3BQ9Y2G0 817 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
HMGB3P13-201ENST00000511263 TNFRSF10CO14798 259 aa6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 NME1P15531 152 aaKnown RBP6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 CLEC16AQ2KHT3 1053 aa6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 TMPRSS7Q7RTY8 843 aa6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 BAHD1Q8TBE0 780 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 ENOX1Q8TC92 643 aaKnown RBP6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 SMARCC1Q92922 1105 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 KREMEN1Q96MU8 473 aa6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 SRRTQ9BXP5 876 aaKnown RBP6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 PLAGL2Q9UPG8 496 aa6.55□□□□□ -1.36
HMGB3P13-201ENST00000511263 IKZF1Q13422 519 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 NKPD1Q17RQ9 610 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 CDKAL1Q5VV42 579 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 PI4K2BQ8TCG2 481 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 ACBD3Q9H3P7 528 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 PRDM7Q9NQW5 492 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
HMGB3P13-201ENST00000511263 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 SSBP05455 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 GUCY2CP25092 1073 aa6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 MESP2Q0VG99 397 aa6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 PPP1R13LQ8WUF5 828 aa6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 HSPA12BQ96MM6 686 aa6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB3P13-201ENST00000511263 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 H3BS24 57 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms