RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MAP3K7O43318 606 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.94
HTT-208ENST00000510626 KRR1Q13601 381 aaKnown RBP9.21□□□□□ -0.94
HTT-208ENST00000510626 CCDC92Q53HC0 331 aaPredicted RBP9.21□□□□□ -0.94
HTT-208ENST00000510626 THUMPD2Q9BTF0 503 aaKnown RBP9.21□□□□□ -0.94
HTT-208ENST00000510626 SPTLC3Q9NUV7 552 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 A0A1B0GW55 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4L4P0CJ87 422 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 CACYBPQ9HB71 228 aaKnown RBP9.21□□□□□ -0.94
HTT-208ENST00000510626 DUX4Q9UBX2 424 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 ASIC3Q9UHC3 531 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 SLC27A2O14975 620 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 PBKQ96KB5 322 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.21□□□□□ -0.94
HTT-208ENST00000510626 ASXL2Q76L83 1435 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 ORC6Q9Y5N6 252 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 DIS3Q9Y2L1 958 aaKnown RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 ATP2B3Q16720 1220 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 STRN3Q13033 797 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 ZC3H6P61129 1189 aaKnown RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 KLHL30Q0D2K2 578 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 MKRN3Q13064 507 aaKnown RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 CCDC13Q8IYE1 715 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 KRT12Q99456 494 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 DCTN3O75935 186 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 ZNF274Q96GC6 653 aaPredicted RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 TPCN1Q9ULQ1 816 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 PFDN6O15212 129 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 CLTAP09496 248 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 BPIFB4P59827 614 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 STAMBPL1Q96FJ0 436 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 TRIM15Q9C019 465 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 KRIT1O00522 736 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 CCDC125Q86Z20 511 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 TRIM11Q96F44 468 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 GSDMAQ96QA5 445 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 SEMA3EO15041 775 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 SPATA1Q5VX52 437 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 LDHAL6AQ6ZMR3 332 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 ST13P4Q8IZP2 240 aaPredicted RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 METTL14Q9HCE5 456 aaKnown RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 COL17A1Q9UMD9 1497 aaPredicted RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 NDE1Q9NXR1 346 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 ZNF215Q9UL58 517 aaPredicted RBP9.2□□□□□ -0.94
HTT-208ENST00000510626 SLC4A4Q9Y6R1 1079 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 MYH10P35580 1976 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 MORC3Q14149 939 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 TADA2BQ86TJ2 420 aa9.2□□□□□ -0.94
HTT-208ENST00000510626 MCM7P33993 719 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 CCT6AP40227 531 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 ZNF449Q6P9G9 518 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 IPO5O00410 1097 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 IFT122Q9HBG6 1241 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 UGGT2Q9NYU1 1516 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 ARID5AQ03989 594 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 IFT88Q13099 833 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 MTX1Q13505 466 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 TERB1Q8NA31 727 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 TARSL2A2RTX5 802 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 HAND2P61296 217 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 BPIFA3Q9BQP9 254 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 DDX21Q9NR30 783 aaKnown RBP eCLIP9.19□□□□□ -0.94
HTT-208ENST00000510626 F6X3S4 739 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 MAN1A2O60476 641 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 PRPF31Q8WWY3 499 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 THOC1Q96FV9 657 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 UIMC1Q96RL1 719 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 KRT15P19012 456 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 SLC9C2Q5TAH2 1124 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 NBPF5PQ86XG9 351 aaPredicted RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 SERPINI1Q99574 410 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 TSC22D3Q99576 134 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 MUM1L1Q5H9M0 696 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 CYP7A1P22680 504 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 PEX19P40855 299 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 PDZD4Q76G19 769 aaPredicted RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 SH2D4AQ9H788 454 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 POLR2DO15514 142 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 STAT1P42224 750 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 ARHGEF18Q6ZSZ5 1173 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 IFNL2Q8IZJ0 200 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 SPDL1Q96EA4 605 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 SAAL1Q96ER3 474 aa9.19□□□□□ -0.94
HTT-208ENST00000510626 XPO4Q9C0E2 1151 aaKnown RBP9.19□□□□□ -0.94
HTT-208ENST00000510626 ARHGEF10O15013 1369 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 TTLL7Q6ZT98 887 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms