RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 RFXAPO00287 272 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 ALDH1L1O75891 902 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 ALADP13716 330 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 MYOGP15173 224 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 KRT40Q6A162 431 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 GJD3Q8N144 294 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
SNF8-207ENST00000509995 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 C12orf42Q96LP6 360 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 PPP1R12CQ9BZL4 782 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 IL23AQ9NPF7 189 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 ZBTB21Q9ULJ3 1066 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 PCDHA11Q9Y5I1 949 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 ZNFX1Q9P2E3 1918 aaKnown RBP13.46□□□□□ -0.25
SNF8-207ENST00000509995 COL4A4P53420 1690 aaPredicted RBP13.46□□□□□ -0.26
SNF8-207ENST00000509995 CDK5RAP2Q96SN8 1893 aa13.46□□□□□ -0.26
SNF8-207ENST00000509995 STRNO43815 780 aa13.45□□□□□ -0.26
SNF8-207ENST00000509995 COBLO75128 1261 aa13.45□□□□□ -0.26
SNF8-207ENST00000509995 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
SNF8-207ENST00000509995 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
SNF8-207ENST00000509995 TSEN34Q9BSV6 310 aaKnown RBP13.45□□□□□ -0.26
SNF8-207ENST00000509995 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
SNF8-207ENST00000509995 GINM1Q9NU53 330 aa13.45□□□□□ -0.26
SNF8-207ENST00000509995 DMDP11532 3685 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 SPDYE16A6NNV3 312 aaPredicted RBP13.44□□□□□ -0.26
SNF8-207ENST00000509995 ADAMTS4O75173 837 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 GDF11O95390 407 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 PHKA1P46020 1223 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 ACLYP53396 1101 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 CATSPERGQ6ZRH7 1159 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 NRBP1Q9UHY1 535 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 CACNA1BQ00975 2339 aa13.44□□□□□ -0.26
SNF8-207ENST00000509995 EPOPA6NHQ4 379 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 ZBTB22O15209 634 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
SNF8-207ENST00000509995 FGBP02675 491 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
SNF8-207ENST00000509995 OTOP2Q7RTS6 562 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 LENG1Q96BZ8 264 aaPredicted RBP13.43□□□□□ -0.26
SNF8-207ENST00000509995 MOV10L1Q9BXT6 1211 aaKnown RBP13.43□□□□□ -0.26
SNF8-207ENST00000509995 SRCIN1Q9C0H9 1055 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
SNF8-207ENST00000509995 MOXD2PA6NHM9 499 aa13.42□□□□□ -0.26
SNF8-207ENST00000509995 VCAM1P19320 739 aa13.42□□□□□ -0.26
SNF8-207ENST00000509995 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
SNF8-207ENST00000509995 MECOMQ03112 1051 aa13.42□□□□□ -0.26
SNF8-207ENST00000509995 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
SNF8-207ENST00000509995 FEZ1Q99689 392 aa13.42□□□□□ -0.26
SNF8-207ENST00000509995 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
SNF8-207ENST00000509995 PDS5AQ29RF7 1337 aaKnown RBP13.41□□□□□ -0.26
SNF8-207ENST00000509995 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 EYA2O00167 538 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 DCXO43602 365 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 CA3P07451 260 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 ERCC3P19447 782 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 CYP2C18P33260 490 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 CDK7P50613 346 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 RASGRF1Q13972 1273 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 SPTY2D1Q68D10 685 aaPredicted RBP13.41□□□□□ -0.26
SNF8-207ENST00000509995 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
SNF8-207ENST00000509995 SHCBP1Q8NEM2 672 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 DHX36Q9H2U1 1008 aaKnown RBP13.41□□□□□ -0.26
SNF8-207ENST00000509995 CERS4Q9HA82 394 aa13.41□□□□□ -0.26
SNF8-207ENST00000509995 ELP1O95163 1332 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 AKR1A1P14550 325 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 ATP2A2P16615 1042 aaKnown RBP13.4□□□□□ -0.26
SNF8-207ENST00000509995 SLC4A10Q6U841 1118 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 HFE2Q6ZVN8 426 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 TEX11Q8IYF3 940 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 ABRAQ8N0Z2 381 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 KLHDC9Q8NEP7 349 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 GLT1D1Q96MS3 346 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
SNF8-207ENST00000509995 ZFHX2Q9C0A1 2572 aaPredicted RBP13.39□□□□□ -0.27
SNF8-207ENST00000509995 PTPRZ1P23471 2315 aaPredicted RBP13.39□□□□□ -0.27
SNF8-207ENST00000509995 TAL1P17542 331 aaPredicted RBP13.39□□□□□ -0.27
SNF8-207ENST00000509995 USP14P54578 494 aa13.39□□□□□ -0.27
SNF8-207ENST00000509995 KCNA10Q16322 511 aa13.39□□□□□ -0.27
SNF8-207ENST00000509995 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
SNF8-207ENST00000509995 CCDC102BQ68D86 513 aa13.39□□□□□ -0.27
SNF8-207ENST00000509995 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
SNF8-207ENST00000509995 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
SNF8-207ENST00000509995 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
SNF8-207ENST00000509995 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
SNF8-207ENST00000509995 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
SNF8-207ENST00000509995 CACNA1HO95180 2353 aa13.38□□□□□ -0.27
SNF8-207ENST00000509995 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
SNF8-207ENST00000509995 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
SNF8-207ENST00000509995 TLR3O15455 904 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms