RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 ECHDC1Q9NTX5 307 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-204ENST00000509994 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-204ENST00000509994 USP17L12C9JPN9 530 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 USP17L21D6R901 530 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 GUCY1A2P33402 732 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 GABPAQ06546 454 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 CCL14Q16627 93 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 TSHZ3Q63HK5 1081 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 C11orf49Q9H6J7 331 aa12.18□□□□□ -0.46
SCARB2-204ENST00000509994 COL11A1P12107 1806 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-204ENST00000509994 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 CNMDO75829 334 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 FLOT1O75955 427 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 CHGBP05060 677 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 APPP05067 770 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 AKR1B1P15121 316 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCARB2-204ENST00000509994 CACNB2Q08289 660 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-204ENST00000509994 COG2Q14746 738 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 UBE3CQ15386 1083 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 MORN1Q5T089 497 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 BTBD7Q9P203 1132 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
SCARB2-204ENST00000509994 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
SCARB2-204ENST00000509994 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-204ENST00000509994 PTPREP23469 700 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 CCND3P30281 292 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-204ENST00000509994 CDK8P49336 464 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 LPAR1Q92633 364 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
SCARB2-204ENST00000509994 MKNK2Q9HBH9 465 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-204ENST00000509994 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-204ENST00000509994 PARP14Q460N5 1801 aa12.16□□□□□ -0.46
SCARB2-204ENST00000509994 ZNFX1Q9P2E3 1918 aaKnown RBP12.15□□□□□ -0.46
SCARB2-204ENST00000509994 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
SCARB2-204ENST00000509994 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
SCARB2-204ENST00000509994 TDO2P48775 406 aa12.15□□□□□ -0.46
SCARB2-204ENST00000509994 LRRFIP1Q32MZ4 808 aaKnown RBP12.15□□□□□ -0.46
SCARB2-204ENST00000509994 MAP3K21Q5TCX8 1036 aa12.15□□□□□ -0.46
SCARB2-204ENST00000509994 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
SCARB2-204ENST00000509994 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
SCARB2-204ENST00000509994 ISY1Q9ULR0 285 aaKnown RBP12.15□□□□□ -0.46
SCARB2-204ENST00000509994 SMIM22K7EJ46 135 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
SCARB2-204ENST00000509994 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
SCARB2-204ENST00000509994 SYN1P17600 705 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 ADORA2AP29274 412 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 GRB14Q14449 540 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 POTEEQ6S8J3 1075 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 USP6NLQ92738 828 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 ATG4CQ96DT6 458 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 MOV10L1Q9BXT6 1211 aaKnown RBP12.14□□□□□ -0.47
SCARB2-204ENST00000509994 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 SLC5A4Q9NY91 659 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 CTDP1Q9Y5B0 961 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-204ENST00000509994 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 ZNF236Q9UL36 1845 aa12.14□□□□□ -0.47
SCARB2-204ENST00000509994 RLFQ13129 1914 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 DNAH12Q6ZR08 3092 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 ERC2O15083 957 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 RNF113AO15541 343 aaKnown RBP12.13□□□□□ -0.47
SCARB2-204ENST00000509994 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-204ENST00000509994 ERCC3P19447 782 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 CYP2C19P33261 490 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 APPBP2Q92624 585 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 FLRT1Q9NZU1 646 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 TMX2Q9Y320 296 aa12.13□□□□□ -0.47
SCARB2-204ENST00000509994 GPAA1O43292 621 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 STRNO43815 780 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 GNAT2P19087 354 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 DSG3P32926 999 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 NPLOC4Q8TAT6 608 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
SCARB2-204ENST00000509994 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
SCARB2-204ENST00000509994 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms