RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PCDHB10Q9UN67 800 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 ZNF609O15014 1411 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 DIAPH1O60610 1272 aaKnown RBP6.52□□□□□ -1.37
NEK1-204ENST00000509912 XRCC5P13010 732 aaKnown RBP6.52□□□□□ -1.37
NEK1-204ENST00000509912 IGBP1P78318 339 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 RPUSD2Q8IZ73 545 aaKnown RBP6.52□□□□□ -1.37
NEK1-204ENST00000509912 UBR7Q8N806 425 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
NEK1-204ENST00000509912 STAG1Q8WVM7 1258 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 SEC16BQ96JE7 1060 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 MAPK8IP1Q9UQF2 711 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 KDM3BQ7LBC6 1761 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 SOX9P48436 509 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 TGFB2P61812 414 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 TXNDC11Q6PKC3 985 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 KCNB2Q92953 911 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 KCPQ6ZWJ8 1503 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 WDR90Q96KV7 1748 aa6.52□□□□□ -1.37
NEK1-204ENST00000509912 PPP1R12AO14974 1030 aaPredicted RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 CENPBP07199 599 aaPredicted RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 CLCQ05315 142 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 HIF1AQ16665 826 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 UBE2Q2Q8WVN8 375 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 NKD1Q969G9 470 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 LGR4Q9BXB1 951 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 THSD7BQ9C0I4 1608 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 ZBTB42B2RXF5 422 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 NFKBIEO00221 500 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 GREM1O60565 184 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 MAPTP10636 758 aaKnown RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 HGSNATQ68CP4 663 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 C6orf15Q6UXA7 325 aaPredicted RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 TRIM46Q7Z4K8 759 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 PDGFDQ9GZP0 370 aaPredicted RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 VPS33BQ9H267 617 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 PCDH12Q9NPG4 1184 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 KAT6BQ8WYB5 2073 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 DICER1Q9UPY3 1922 aaKnown RBP6.51□□□□□ -1.37
NEK1-204ENST00000509912 DDAH1O94760 285 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 ECEL1O95672 775 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 PSAPP07602 524 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 ANAPC15P60006 121 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 PGBD3Q8N328 593 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 ACSBG1Q96GR2 724 aa6.51□□□□□ -1.37
NEK1-204ENST00000509912 LAMB1P07942 1786 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 RNF123Q5XPI4 1314 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 A0A096LPE4 126 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 A0A1W2PPZ6 126 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 GIPC1O14908 333 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 BNIP3LO60238 219 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 CCINQ13939 588 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 SPNS2Q8IVW8 549 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 CEP120Q8N960 986 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 DCAF5Q96JK2 942 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 SYT17Q9BSW7 474 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 TEX13AQ9BXU3 409 aaPredicted RBP6.5□□□□□ -1.37
NEK1-204ENST00000509912 KCNH4Q9UQ05 1017 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 LTBP3Q9NS15 1303 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 CDC45O75419 566 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 HSD3B2P26439 372 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 ZYXQ15942 572 aaKnown RBP6.5□□□□□ -1.37
NEK1-204ENST00000509912 PRKAG3Q9UGI9 489 aa6.5□□□□□ -1.37
NEK1-204ENST00000509912 PLAURQ03405 335 aa6.49□□□□□ -1.37
NEK1-204ENST00000509912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.49□□□□□ -1.37
NEK1-204ENST00000509912 RAVER1Q8IY67 606 aaKnown RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 POP1Q99575 1024 aaKnown RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 ERBB4Q15303 1308 aa6.49□□□□□ -1.37
NEK1-204ENST00000509912 HCLS1P14317 486 aaPredicted RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 PCBP4P57723 403 aaKnown RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 AMPD3Q01432 767 aa6.49□□□□□ -1.37
NEK1-204ENST00000509912 CBX2Q14781 532 aaPredicted RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 DHX32Q7L7V1 743 aaKnown RBP6.49□□□□□ -1.37
NEK1-204ENST00000509912 NME9Q86XW9 330 aa6.49□□□□□ -1.37
NEK1-204ENST00000509912 TRIM42Q8IWZ5 723 aa6.49□□□□□ -1.37
NEK1-204ENST00000509912 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
NEK1-204ENST00000509912 ST20-MTHFSA0A0A6YYL1 179 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 FAM187AA6NFU0 413 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 ATXN7O15265 892 aaPredicted RBP6.48□□□□□ -1.37
NEK1-204ENST00000509912 MMP14P50281 582 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 GYS2P54840 703 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 AGMOQ6ZNB7 445 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 PPP4R2Q9NY27 417 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 HEG1Q9ULI3 1381 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 GJB6O95452 261 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 F11P03951 625 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 POLD1P28340 1107 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 DDR2Q16832 855 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 CEP135Q66GS9 1140 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 MAP1SQ66K74 1059 aaPredicted RBP6.48□□□□□ -1.37
NEK1-204ENST00000509912 JAMLQ86YT9 394 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 IFNL2Q8IZJ0 200 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms