RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 CCDC39Q9UFE4 941 aa10.81□□□□□ -0.68
TRAPPC11-206ENST00000509857 ST14Q9Y5Y6 855 aa10.81□□□□□ -0.68
TRAPPC11-206ENST00000509857 ADAMTS4O75173 837 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 CBX7O95931 251 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 RNF4P78317 190 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 ARID5AQ03989 594 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 TNK2Q07912 1038 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 Q8N3U1 123 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 HRASLS5Q96KN8 279 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 UNC13AQ9UPW8 1703 aa10.8□□□□□ -0.68
TRAPPC11-206ENST00000509857 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC11-206ENST00000509857 RUFY4Q6ZNE9 571 aa10.79□□□□□ -0.68
TRAPPC11-206ENST00000509857 TMEM192Q8IY95 271 aa10.79□□□□□ -0.68
TRAPPC11-206ENST00000509857 DTWD2Q8NBA8 298 aa10.79□□□□□ -0.68
TRAPPC11-206ENST00000509857 CPLX3Q8WVH0 158 aa10.79□□□□□ -0.68
TRAPPC11-206ENST00000509857 PITPNM2Q9BZ72 1349 aa10.79□□□□□ -0.68
TRAPPC11-206ENST00000509857 RBAK-RBAKDNI3L0D1 243 aa10.78□□□□□ -0.68
TRAPPC11-206ENST00000509857 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
TRAPPC11-206ENST00000509857 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC11-206ENST00000509857 CLEC3AO75596 197 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 WNT11O96014 354 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 THAP5Q7Z6K1 395 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 SLC6A18Q96N87 628 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 SEMA3GQ9NS98 782 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 KCNH3Q9ULD8 1083 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 SLC5A6Q9Y289 635 aa10.77□□□□□ -0.69
TRAPPC11-206ENST00000509857 CASP7P55210 303 aa10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 AOC3Q16853 763 aa10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 UNC5AQ6ZN44 842 aa10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 MCF2L2Q86YR7 1114 aa10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 DHRS1Q96LJ7 313 aa10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 HSPA12BQ96MM6 686 aa10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 SUCOQ9UBS9 1254 aaKnown RBP10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 ANGEL1Q9UNK9 670 aaKnown RBP10.76□□□□□ -0.69
TRAPPC11-206ENST00000509857 CECR2Q9BXF3 1484 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 LRRN2O75325 713 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 SRFP11831 508 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 CHMP4BP1P59074 171 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 FAM169BQ8N8A8 192 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 ASB11Q8WXH4 323 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 GPR62Q9BZJ7 368 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 SLC12A7Q9Y666 1083 aa10.75□□□□□ -0.69
TRAPPC11-206ENST00000509857 DNAJA1P31689 397 aaKnown RBP10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 PMS1P54277 932 aaKnown RBP10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 BNIP3Q12983 259 aa10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 SPRED2Q7Z698 418 aa10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 TTC6Q86TZ1 520 aa10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 DUSP15Q9H1R2 295 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 PAK6Q9NQU5 681 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC11-206ENST00000509857 A0A1W2PQH9 124 aa10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 H3BS24 57 aa10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 SSBP05455 408 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 NBPF9Q3BBW0 867 aa10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 CDKAL1Q5VV42 579 aa10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 FLCNQ8NFG4 579 aa10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
TRAPPC11-206ENST00000509857 ZNF574Q6ZN55 896 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC11-206ENST00000509857 ZNF214Q9UL59 606 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC11-206ENST00000509857 CD8BP10966 210 aa10.71□□□□□ -0.69
TRAPPC11-206ENST00000509857 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
TRAPPC11-206ENST00000509857 SMARCC1Q92922 1105 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC11-206ENST00000509857 TRIT1Q9H3H1 467 aaKnown RBP10.71□□□□□ -0.69
TRAPPC11-206ENST00000509857 LTBP3Q9NS15 1303 aa10.71□□□□□ -0.69
TRAPPC11-206ENST00000509857 SMARCA4P51532 1647 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 FAM86C2PA6NEL3 165 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 GAB4Q2WGN9 574 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 BBS9Q3SYG4 887 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 ZNF512BQ96KM6 892 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 ATP13A1Q9HD20 1204 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 GPATCH2Q9NW75 528 aa10.7□□□□□ -0.7
TRAPPC11-206ENST00000509857 CD96P40200 585 aa10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 GP2P55259 537 aaKnown RBP10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 TNNI3KQ59H18 835 aa10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 ANGEL2Q5VTE6 544 aaKnown RBP10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 AGBL5Q8NDL9 886 aa10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 MKRN2Q9H000 416 aaKnown RBP10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 PRKAG3Q9UGI9 489 aa10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
TRAPPC11-206ENST00000509857 SHISA3A0PJX4 238 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 C9IYK1 514 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 TMPRSS7Q7RTY8 843 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 TSPYL5Q86VY4 417 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 ENOX1Q8TC92 643 aaKnown RBP10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 UBE2FQ969M7 185 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 ZNF408Q9H9D4 720 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 LMCD1Q9NZU5 365 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 ZSWIM5Q9P217 1185 aa10.68□□□□□ -0.7
TRAPPC11-206ENST00000509857 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 FUT4P22083 530 aa10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 ETFBP38117 255 aa10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 NMIQ13287 307 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 IKZF1Q13422 519 aa10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 ANKRD39Q53RE8 183 aa10.67□□□□□ -0.7
TRAPPC11-206ENST00000509857 PRR13Q9NZ81 148 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms