RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 SPATC1LQ9H0A9 340 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 MROH8Q9H579 483 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 PRDM6Q9NQX0 595 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 MCM9Q9NXL9 1143 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 MAGEB6P1A0A0J9YX57 407 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 FLOT1O75955 427 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 RARBP10826 455 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 TRIM27P14373 513 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 LRRC41Q15345 812 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 RNF180Q86T96 592 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 MB21D1Q8N884 522 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
MBD4-208ENST00000509828 BCL11AQ9H165 835 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
MBD4-208ENST00000509828 TRIM43BA6NCK2 446 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 RAD21O60216 631 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 PQBP1O60828 265 aaKnown RBP12.55□□□□□ -0.4
MBD4-208ENST00000509828 COBLO75128 1261 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 CLTBP09497 229 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 SHMT1P34896 483 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 PLCD1P51178 756 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 POLA2Q14181 598 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 TRIM43Q96BQ3 446 aaPredicted RBP12.55□□□□□ -0.4
MBD4-208ENST00000509828 TTYH1Q9H313 450 aaPredicted RBP12.55□□□□□ -0.4
MBD4-208ENST00000509828 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 TMEM39AQ9NV64 488 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
MBD4-208ENST00000509828 LAMA3Q16787 3333 aa12.55□□□□□ -0.4
MBD4-208ENST00000509828 DCDC2CA8MYV0 355 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 DSG3P32926 999 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 FPGSQ05932 587 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 KCTD2Q14681 263 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 FAM47AQ5JRC9 791 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
MBD4-208ENST00000509828 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
MBD4-208ENST00000509828 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 TMEM57Q8N5G2 664 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 VTI1AQ96AJ9 217 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 MMP19Q99542 508 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 TLR7Q9NYK1 1049 aaKnown RBP12.54□□□□□ -0.4
MBD4-208ENST00000509828 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
MBD4-208ENST00000509828 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.53□□□□□ -0.4
MBD4-208ENST00000509828 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.53□□□□□ -0.4
MBD4-208ENST00000509828 SLC25A27O95847 323 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 PGK1P00558 417 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 SNX17Q15036 470 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 TTF1Q15361 905 aaPredicted RBP12.53□□□□□ -0.4
MBD4-208ENST00000509828 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 CCDC129Q6ZRS4 1044 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 AACSQ86V21 672 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
MBD4-208ENST00000509828 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 MAML3Q96JK9 1138 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 CNPY2Q9Y2B0 182 aa12.53□□□□□ -0.4
MBD4-208ENST00000509828 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 A0A1W2PRG0 241 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 PGK2P07205 417 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 CCDC174Q6PII3 467 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 ITPRIPQ8IWB1 547 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 SWAP70Q9UH65 585 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.41
MBD4-208ENST00000509828 SIPA1L1O43166 1804 aa12.52□□□□□ -0.41
MBD4-208ENST00000509828 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 ICA1Q05084 483 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 SLC44A5Q8NCS7 719 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 NUP133Q8WUM0 1156 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
MBD4-208ENST00000509828 TINF2Q9BSI4 451 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 STARD7Q9NQZ5 370 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 NOP58Q9Y2X3 529 aaKnown RBP12.51□□□□□ -0.41
MBD4-208ENST00000509828 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
MBD4-208ENST00000509828 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
MBD4-208ENST00000509828 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 TNFRSF10AO00220 468 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 KIAA0355O15063 1070 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 IGHA2P01877 340 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 AKR1A1P14550 325 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 DNAJB2P25686 324 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 STAT3P40763 770 aa12.5□□□□□ -0.41
MBD4-208ENST00000509828 GRIN2CQ14957 1233 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms