RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 MCMDC2Q4G0Z9 681 aa28.29■■■□□ 2.12
ATP2C1-217ENST00000509662 TXNRD2Q9NNW7 524 aa28.29■■■□□ 2.12
ATP2C1-217ENST00000509662 TMX2Q9Y320 296 aa28.29■■■□□ 2.12
ATP2C1-217ENST00000509662 RABGAP1Q9Y3P9 1069 aa28.29■■■□□ 2.12
ATP2C1-217ENST00000509662 MAPK4P31152 587 aa28.28■■■□□ 2.12
ATP2C1-217ENST00000509662 ERVK-9P63128 1117 aa28.28■■■□□ 2.12
ATP2C1-217ENST00000509662 ERVK-24P63145 666 aa28.28■■■□□ 2.12
ATP2C1-217ENST00000509662 ZNF589Q86UQ0 364 aaPredicted RBP28.28■■■□□ 2.12
ATP2C1-217ENST00000509662 LPAR1Q92633 364 aa28.28■■■□□ 2.12
ATP2C1-217ENST00000509662 HOXC10Q9NYD6 342 aa28.28■■■□□ 2.12
ATP2C1-217ENST00000509662 HIP1O00291 1037 aa28.27■■■□□ 2.12
ATP2C1-217ENST00000509662 EN2P19622 333 aaPredicted RBP28.27■■■□□ 2.12
ATP2C1-217ENST00000509662 STK11IPQ8N1F8 1099 aa28.27■■■□□ 2.12
ATP2C1-217ENST00000509662 NAPBQ9H115 298 aa28.27■■■□□ 2.12
ATP2C1-217ENST00000509662 DIAPH3Q9NSV4 1193 aa28.27■■■□□ 2.12
ATP2C1-217ENST00000509662 SLC3A2P08195 630 aaKnown RBP28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 CCNA1P78396 465 aa28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 ATP2B2Q01814 1243 aa28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 COG2Q14746 738 aa28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 LBX2Q6XYB7 198 aa28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 SIAH1Q8IUQ4 282 aa28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 ZNF444Q8N0Y2 327 aaPredicted RBP28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 TANGO6Q9C0B7 1094 aa28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 RBBP6Q7Z6E9 1792 aaKnown RBP28.26■■■□□ 2.11
ATP2C1-217ENST00000509662 ROBO3Q96MS0 1386 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 CCDC171Q6TFL3 1326 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 EEF2P13639 858 aaKnown RBP28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 Q3C1V9 767 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 VPS53Q5VIR6 699 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 VCPKMTQ9H867 229 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 CWC22Q9HCG8 908 aaKnown RBP28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 GJD2Q9UKL4 321 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 DOCK3Q8IZD9 2030 aa28.25■■■□□ 2.11
ATP2C1-217ENST00000509662 ELNP15502 786 aa28.24■■■□□ 2.11
ATP2C1-217ENST00000509662 RASA1P20936 1047 aa28.24■■■□□ 2.11
ATP2C1-217ENST00000509662 MTFR1Q15390 333 aa28.24■■■□□ 2.11
ATP2C1-217ENST00000509662 CWC27Q6UX04 472 aaKnown RBP28.24■■■□□ 2.11
ATP2C1-217ENST00000509662 CLEC10AQ8IUN9 316 aa28.24■■■□□ 2.11
ATP2C1-217ENST00000509662 CENPFP49454 3210 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 PEX10O60683 326 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 CCL5P13501 91 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 PDE4BQ07343 736 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 NKX2-3Q8TAU0 364 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 NUDT12Q9BQG2 462 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 RNF208Q9H0X6 261 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 GOPCQ9HD26 462 aa28.23■■■□□ 2.11
ATP2C1-217ENST00000509662 SOCS4Q8WXH5 440 aa28.22■■■□□ 2.11
ATP2C1-217ENST00000509662 SPDYE16A6NNV3 312 aaPredicted RBP28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 WDR46O15213 610 aaKnown RBP28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 POTEEQ6S8J3 1075 aa28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 PLEKHH3Q7Z736 793 aa28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 SPICE1Q8N0Z3 855 aa28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 PORCNQ9H237 461 aa28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 IL25Q9H293 177 aa28.21■■■□□ 2.11
ATP2C1-217ENST00000509662 INHAP05111 366 aa28.2■■■□□ 2.1
ATP2C1-217ENST00000509662 GJB1P08034 283 aa28.2■■■□□ 2.1
ATP2C1-217ENST00000509662 HSPD1P10809 573 aaKnown RBP28.2■■■□□ 2.1
ATP2C1-217ENST00000509662 PPARAQ07869 468 aa28.2■■■□□ 2.1
ATP2C1-217ENST00000509662 KIAA1755Q5JYT7 1200 aa28.2■■■□□ 2.1
ATP2C1-217ENST00000509662 ZMYM6O95789 1325 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 CNMDO75829 334 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 FLOT1O75955 427 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 CHMLP26374 656 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 MFAP1P55081 439 aaKnown RBP28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 ALX1Q15699 326 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 BMP2KLQ5H9B9 411 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 GPR142Q7Z601 462 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 MB21D1Q8N884 522 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 NYAP2Q9P242 653 aa28.19■■■□□ 2.1
ATP2C1-217ENST00000509662 TNRC18O15417 2968 aaPredicted RBP28.18■■■□□ 2.1
ATP2C1-217ENST00000509662 RAD21O60216 631 aa28.18■■■□□ 2.1
ATP2C1-217ENST00000509662 TRMT44Q8IYL2 757 aaKnown RBP28.18■■■□□ 2.1
ATP2C1-217ENST00000509662 BTBD7Q9P203 1132 aa28.18■■■□□ 2.1
ATP2C1-217ENST00000509662 RAD50Q92878 1312 aa28.18■■■□□ 2.1
ATP2C1-217ENST00000509662 PRDM1O75626 825 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 HMGCRP04035 888 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 XRCC5P13010 732 aaKnown RBP28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 CAPN2P17655 700 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 CYP2B6P20813 491 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 DSG3P32926 999 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 WDR78Q5VTH9 848 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 UNC93B1Q9H1C4 597 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 IVNS1ABPQ9Y6Y0 642 aa28.17■■■□□ 2.1
ATP2C1-217ENST00000509662 TSPY3P0CV98 308 aa28.16■■■□□ 2.1
ATP2C1-217ENST00000509662 TSPY8P0CW00 308 aa28.16■■■□□ 2.1
ATP2C1-217ENST00000509662 RGS2P41220 211 aa28.16■■■□□ 2.1
ATP2C1-217ENST00000509662 GJA8P48165 433 aa28.16■■■□□ 2.1
ATP2C1-217ENST00000509662 PDE4DIPQ5VU43 2346 aa28.15■■■□□ 2.1
ATP2C1-217ENST00000509662 MORN1Q5T089 497 aa28.15■■■□□ 2.1
ATP2C1-217ENST00000509662 CLIP2Q9UDT6 1046 aa28.15■■■□□ 2.1
ATP2C1-217ENST00000509662 FGAP02671 866 aa28.14■■■□□ 2.1
ATP2C1-217ENST00000509662 SAMD1Q6SPF0 538 aaPredicted RBP28.14■■■□□ 2.1
ATP2C1-217ENST00000509662 IGKV6D-41A0A0C4DH26 115 aa28.13■■■□□ 2.09
ATP2C1-217ENST00000509662 SLC15A5A6NIM6 579 aa28.13■■■□□ 2.09
ATP2C1-217ENST00000509662 PPP4R3BQ5MIZ7 849 aa28.13■■■□□ 2.09
ATP2C1-217ENST00000509662 NEDD1Q8NHV4 660 aa28.13■■■□□ 2.09
ATP2C1-217ENST00000509662 U2AF1L4Q8WU68 220 aaKnown RBP28.13■■■□□ 2.09
ATP2C1-217ENST00000509662 USP6NLQ92738 828 aa28.13■■■□□ 2.09
ATP2C1-217ENST00000509662 SPATC1LQ9H0A9 340 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms