RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 NAP1L2Q9ULW6 460 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-206ENST00000509429 CYP7A1P22680 504 aa6.17□□□□□ -1.42
NIPBL-206ENST00000509429 DEKP35659 375 aaKnown RBP6.17□□□□□ -1.42
NIPBL-206ENST00000509429 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
NIPBL-206ENST00000509429 IGDCC3Q8IVU1 814 aa6.17□□□□□ -1.42
NIPBL-206ENST00000509429 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
NIPBL-206ENST00000509429 SH3RF3Q8TEJ3 882 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-206ENST00000509429 ABCB6Q9NP58 842 aa6.17□□□□□ -1.42
NIPBL-206ENST00000509429 E9PSI1 815 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 MPSTP25325 297 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 ATXN1P54253 815 aaKnown RBP6.16□□□□□ -1.42
NIPBL-206ENST00000509429 MFAP1P55081 439 aaKnown RBP6.16□□□□□ -1.42
NIPBL-206ENST00000509429 YBX1P67809 324 aaKnown RBP6.16□□□□□ -1.42
NIPBL-206ENST00000509429 OLFML2BQ68BL8 750 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 C12orf40Q86WS4 652 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 SIRT2Q8IXJ6 389 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 MFSD2AQ8NA29 543 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 IPO4Q8TEX9 1081 aaKnown RBP6.16□□□□□ -1.42
NIPBL-206ENST00000509429 ACSBG1Q96GR2 724 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 CALR3Q96L12 384 aaKnown RBP6.16□□□□□ -1.42
NIPBL-206ENST00000509429 DUSP13Q9UII6 198 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 ZMIZ1Q9ULJ6 1067 aa6.16□□□□□ -1.42
NIPBL-206ENST00000509429 ARID3CA6NKF2 412 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 ANAPC15P60006 121 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 SMN1Q16637 294 aaKnown RBP6.15□□□□□ -1.42
NIPBL-206ENST00000509429 SULF2Q8IWU5 870 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 ZNF507Q8TCN5 953 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 ZNF526Q8TF50 670 aaPredicted RBP6.15□□□□□ -1.42
NIPBL-206ENST00000509429 LOXL4Q96JB6 756 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 TRAIPQ9BWF2 469 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 TMEM39AQ9NV64 488 aa6.15□□□□□ -1.42
NIPBL-206ENST00000509429 DCDC2CA8MYV0 355 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 ARNTP27540 789 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 CNR2P34972 360 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 ELOAQ14241 798 aaKnown RBP6.14□□□□□ -1.43
NIPBL-206ENST00000509429 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 NLRX1Q86UT6 975 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 CNPY4Q8N129 248 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 SECISBP2LQ93073 1101 aaKnown RBP6.14□□□□□ -1.43
NIPBL-206ENST00000509429 DNAJC2Q99543 621 aaKnown RBP6.14□□□□□ -1.43
NIPBL-206ENST00000509429 DUSP15Q9H1R2 295 aaPredicted RBP6.14□□□□□ -1.43
NIPBL-206ENST00000509429 TRIT1Q9H3H1 467 aaKnown RBP6.14□□□□□ -1.43
NIPBL-206ENST00000509429 CACNA2D2Q9NY47 1150 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 DUSP10Q9Y6W6 482 aa6.14□□□□□ -1.43
NIPBL-206ENST00000509429 TMEM238LA0A1B0GVL6 79 aa6.13□□□□□ -1.43
NIPBL-206ENST00000509429 DUSP4Q13115 394 aa6.13□□□□□ -1.43
NIPBL-206ENST00000509429 PRPF40BQ6NWY9 871 aaKnown RBP6.13□□□□□ -1.43
NIPBL-206ENST00000509429 LDHDQ86WU2 507 aa6.13□□□□□ -1.43
NIPBL-206ENST00000509429 DVL3Q92997 716 aaPredicted RBP6.13□□□□□ -1.43
NIPBL-206ENST00000509429 ABLIM1O14639 778 aa6.12□□□□□ -1.43
NIPBL-206ENST00000509429 KLF10Q13118 480 aa6.12□□□□□ -1.43
NIPBL-206ENST00000509429 SLBPQ14493 270 aaKnown RBP eCLIP6.12□□□□□ -1.43
NIPBL-206ENST00000509429 NLGN1Q8N2Q7 840 aa6.12□□□□□ -1.43
NIPBL-206ENST00000509429 STK32AQ8WU08 396 aa6.12□□□□□ -1.43
NIPBL-206ENST00000509429 ZNF747Q9BV97 191 aa6.12□□□□□ -1.43
NIPBL-206ENST00000509429 EBF1Q9UH73 591 aa6.12□□□□□ -1.43
NIPBL-206ENST00000509429 RBAK-RBAKDNI3L0D1 243 aa6.11□□□□□ -1.43
NIPBL-206ENST00000509429 CFAP70Q5T0N1 1121 aa6.11□□□□□ -1.43
NIPBL-206ENST00000509429 FTSJ3Q8IY81 847 aaKnown RBP6.11□□□□□ -1.43
NIPBL-206ENST00000509429 EXOC8Q8IYI6 725 aa6.11□□□□□ -1.43
NIPBL-206ENST00000509429 GJD3Q8N144 294 aa6.11□□□□□ -1.43
NIPBL-206ENST00000509429 EMILIN2Q9BXX0 1053 aa6.11□□□□□ -1.43
NIPBL-206ENST00000509429 CRTAC1Q9NQ79 661 aa6.11□□□□□ -1.43
NIPBL-206ENST00000509429 GPN3Q9UHW5 284 aaPredicted RBP6.11□□□□□ -1.43
NIPBL-206ENST00000509429 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
NIPBL-206ENST00000509429 PTMAP06454 111 aaKnown RBP6.1□□□□□ -1.43
NIPBL-206ENST00000509429 CAP2P40123 477 aa6.1□□□□□ -1.43
NIPBL-206ENST00000509429 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
NIPBL-206ENST00000509429 FAM43BQ6ZT52 329 aaPredicted RBP6.1□□□□□ -1.43
NIPBL-206ENST00000509429 DDX1Q92499 740 aaKnown RBP6.1□□□□□ -1.43
NIPBL-206ENST00000509429 VPS11Q9H270 941 aa6.1□□□□□ -1.43
NIPBL-206ENST00000509429 BUB1BO60566 1050 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-206ENST00000509429 USPL1Q5W0Q7 1092 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 GPATCH11Q8N954 259 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 CHST13Q8NET6 341 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 SPATA25Q9BR10 227 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 GPATCH2Q9NW75 528 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 PCDHA5Q9Y5H7 936 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 HS3ST3A1Q9Y663 406 aa6.09□□□□□ -1.43
NIPBL-206ENST00000509429 LTKP29376 864 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 INHBEP58166 350 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 HSP90AB4PQ58FF6 505 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 LIPIQ6XZB0 460 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 AEBP1Q8IUX7 1158 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 CLP1Q92989 425 aaKnown RBP6.08□□□□□ -1.44
NIPBL-206ENST00000509429 FBRSQ9HAH7 460 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 ING1Q9UK53 422 aaPredicted RBP6.08□□□□□ -1.44
NIPBL-206ENST00000509429 PCDHA11Q9Y5I1 949 aa6.08□□□□□ -1.44
NIPBL-206ENST00000509429 NME2P22392 152 aa6.07□□□□□ -1.44
NIPBL-206ENST00000509429 FBLN1P23142 703 aa6.07□□□□□ -1.44
NIPBL-206ENST00000509429 TGFB2P61812 414 aa6.07□□□□□ -1.44
NIPBL-206ENST00000509429 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
NIPBL-206ENST00000509429 TSPYL5Q86VY4 417 aaPredicted RBP6.07□□□□□ -1.44
NIPBL-206ENST00000509429 KCNG1Q9UIX4 513 aa6.07□□□□□ -1.44
NIPBL-206ENST00000509429 PCSK5Q92824 1860 aa6.07□□□□□ -1.44
NIPBL-206ENST00000509429 CADPSQ9ULU8 1353 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 PLEKHD1A6NEE1 506 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms