RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CTAGE5O15320 804 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 ECE2O60344 883 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 PPP2R5BQ15173 497 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 TYW1BQ6NUM6 668 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 GRAMD1CQ8IYS0 662 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 CYTH3O43739 400 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 PPP6R2O75170 966 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 AKR1B1P15121 316 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 NPY5RQ15761 445 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
PHF3-209ENST00000509330 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
PHF3-209ENST00000509330 AOPEPQ8N6M6 819 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■□□□ 14.5
PHF3-209ENST00000509330 MYH6P13533 1939 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 GOLGA6L19H0YKK7 550 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 KCNH3Q9ULD8 1083 aa17.09■□□□□ 0.33
PHF3-209ENST00000509330 TEKT1Q969V4 418 aa17.08■□□□□ 0.33
PHF3-209ENST00000509330 FAM163AQ96GL9 167 aaPredicted RBP17.08■□□□□ 0.33
PHF3-209ENST00000509330 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.33
PHF3-209ENST00000509330 ADAMTSL1Q8N6G6 1762 aa17.08■□□□□ 0.33
PHF3-209ENST00000509330 ROBO3Q96MS0 1386 aa17.08■□□□□ 0.32
PHF3-209ENST00000509330 CRKP46108 304 aa17.08■□□□□ 0.32
PHF3-209ENST00000509330 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.32
PHF3-209ENST00000509330 CSRNP2Q9H175 543 aa17.08■□□□□ 0.32
PHF3-209ENST00000509330 FBXO2Q9UK22 296 aaPredicted RBP17.08■□□□□ 0.32
PHF3-209ENST00000509330 TRIM75PA6NK02 468 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 POLR2DO15514 142 aaKnown RBP17.07■□□□□ 0.32
PHF3-209ENST00000509330 MCM7P33993 719 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 CLCN1P35523 988 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
PHF3-209ENST00000509330 RESP18Q5W5W9 173 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 APOBEC3HQ6NTF7 200 aaKnown RBP17.07■□□□□ 0.32
PHF3-209ENST00000509330 CNNM3Q8NE01 707 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 KLRF2D3W0D1 207 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
PHF3-209ENST00000509330 ZNF287Q9HBT7 754 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
PHF3-209ENST00000509330 USP17L5A8MUK1 530 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 CUTAO60888 179 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
PHF3-209ENST00000509330 LRRC37AA6NMS7 1700 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 SLX4Q8IY92 1834 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 GRM4Q14833 912 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 IQCB1Q15051 598 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 ZKSCAN5Q9Y2L8 839 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
PHF3-209ENST00000509330 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 HPSEQ9Y251 543 aa17.06■□□□□ 0.32
PHF3-209ENST00000509330 VWA3AA6NCI4 1184 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 PPIP5K2O43314 1243 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 HMGB2P26583 209 aaKnown RBP17.05■□□□□ 0.32
PHF3-209ENST00000509330 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 SERTAD1Q9UHV2 236 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 CASP1P29466 404 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 DDX60LQ5H9U9 1706 aaKnown RBP17.05■□□□□ 0.32
PHF3-209ENST00000509330 TTC38Q5R3I4 469 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 METTL16Q86W50 562 aaKnown RBP17.05■□□□□ 0.32
PHF3-209ENST00000509330 DHX40Q8IX18 779 aaKnown RBP17.05■□□□□ 0.32
PHF3-209ENST00000509330 GPCPD1Q9NPB8 672 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
PHF3-209ENST00000509330 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
PHF3-209ENST00000509330 PTPREP23469 700 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 CDC25AP30304 524 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
PHF3-209ENST00000509330 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
PHF3-209ENST00000509330 PRR29P0C7W0 189 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
PHF3-209ENST00000509330 STAMQ92783 540 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 DHX58Q96C10 678 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
PHF3-209ENST00000509330 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 PTGDRQ13258 359 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 CNKSR1Q969H4 720 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
PHF3-209ENST00000509330 MYH1P12882 1939 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 ZBTB22O15209 634 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 RAD17O75943 681 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 PTGS1P23219 599 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 DACT2Q5SW24 774 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 CERS3Q8IU89 383 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
PHF3-209ENST00000509330 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 TNFRSF25Q93038 417 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms