RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MORN1Q5T089 497 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 MYSM1Q5VVJ2 828 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 CCDC30Q5VVM6 783 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 DPP9Q86TI2 863 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 CCDC84Q86UT8 332 aaPredicted RBP4.85□□□□□ -1.63
RNF4-211ENST00000509206 GJD3Q8N144 294 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 GTF3C2Q8WUA4 911 aaPredicted RBP4.85□□□□□ -1.63
RNF4-211ENST00000509206 RNF166Q96A37 237 aaPredicted RBP4.85□□□□□ -1.63
RNF4-211ENST00000509206 VTI1AQ96AJ9 217 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 ZNF594Q96JF6 807 aaPredicted RBP4.85□□□□□ -1.63
RNF4-211ENST00000509206 ZBED2Q9BTP6 218 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 PLA2G12BQ9BX93 195 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 STK31Q9BXU1 1019 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 TBC1D2Q9BYX2 928 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 MORF4L1Q9UBU8 362 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 FAM198AQ9UFP1 575 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 VPS9D1Q9Y2B5 631 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 NDUFB9Q9Y6M9 179 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 UTYO14607 1347 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 AK9Q5TCS8 1911 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 CACNA1GO43497 2377 aa4.85□□□□□ -1.63
RNF4-211ENST00000509206 SLC15A5A6NIM6 579 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 GOLGA8CPA6NN73 597 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 USP17L5A8MUK1 530 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 GFRA3O60609 400 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ENTPD3O75355 529 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 TIMP1P01033 207 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 FGBP02675 491 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ACRP10323 421 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 SLC5A1P13866 664 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ITGB8P26012 769 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 TMPOP42166 694 aaKnown RBP4.84□□□□□ -1.63
RNF4-211ENST00000509206 CLK2P49760 499 aaKnown RBP4.84□□□□□ -1.63
RNF4-211ENST00000509206 RGS3P49796 1198 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 PTPN5P54829 565 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 HERVK_113P62684 666 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ERVK-9P63128 1117 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ERVK-24P63145 666 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 MCM6Q14566 821 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 Q3C1V9 767 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 TMEM240Q5SV17 173 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 C1orf53Q5VUE5 145 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 MFSD5Q6N075 450 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 PSRC1Q6PGN9 363 aaPredicted RBP4.84□□□□□ -1.63
RNF4-211ENST00000509206 NUDT18Q6ZVK8 323 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ZNF365Q70YC5 407 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 RNF180Q86T96 592 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 WDR66Q8TBY9 1149 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.84□□□□□ -1.63
RNF4-211ENST00000509206 SLC4A5Q9BY07 1137 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 SLC5A4Q9NY91 659 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 CDH23Q9H251 3354 aa4.84□□□□□ -1.63
RNF4-211ENST00000509206 ZBBXA8MT70 800 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 TRIM6-TRIM34B2RNG4 842 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 SEPT4O43236 478 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 DCXO43602 365 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 PEX10O60683 326 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 LDHBP07195 334 aaKnown RBP4.83□□□□□ -1.64
RNF4-211ENST00000509206 RARBP10826 455 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 PICALMQ13492 652 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 SNX17Q15036 470 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 LRRC41Q15345 812 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 PROX2Q3B8N5 592 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 LMBR1LQ6UX01 489 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 ERMP1Q7Z2K6 904 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 FBXO33Q7Z6M2 555 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 PACS2Q86VP3 889 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 ZFPM1Q8IX07 1006 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 MRPL50Q8N5N7 158 aaKnown RBP4.83□□□□□ -1.64
RNF4-211ENST00000509206 NUP133Q8WUM0 1156 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 USP6NLQ92738 828 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 CLUAP1Q96AJ1 413 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 PRRX2Q99811 253 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 TRIM34Q9BYJ4 488 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 OSBPL5Q9H0X9 879 aaPredicted RBP4.83□□□□□ -1.64
RNF4-211ENST00000509206 PORCNQ9H237 461 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 CERS4Q9HA82 394 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 TXNRD2Q9NNW7 524 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 STARD7Q9NQZ5 370 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 FLRT1Q9NZU1 646 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.83□□□□□ -1.64
RNF4-211ENST00000509206 RBPJLQ9UBG7 517 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 DAGLAQ9Y4D2 1042 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 MTCH2Q9Y6C9 303 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 SLC4A7Q9Y6M7 1214 aa4.83□□□□□ -1.64
RNF4-211ENST00000509206 MROH5Q6ZUA9 1318 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 ZNF521Q96K83 1311 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 ZDBF2Q9HCK1 2354 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 A6NJR5 290 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 DDX11L8A8MPP1 907 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 KIF28PB7ZC32 967 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 C19orf81C9J6K1 198 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 USP17L10C9JJH3 530 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 C3orf80F5H4A9 247 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 RFXAPO00287 272 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 TLR3O15455 904 aaKnown RBP4.82□□□□□ -1.64
RNF4-211ENST00000509206 IFIT1P09914 478 aaKnown RBP4.82□□□□□ -1.64
RNF4-211ENST00000509206 CSF2RAP15509 400 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 CD46P15529 392 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 HOXA7P31268 230 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms