RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 GINM1Q9NU53 330 aa17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 TRAF5O00463 557 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 CCDC84Q86UT8 332 aaPredicted RBP17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 RBM28Q9NW13 759 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 A0A1W2PRG0 241 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 GJB2P29033 226 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 ECE1P42892 770 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 GRM4Q14833 912 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 CWC22Q9HCG8 908 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-211ENST00000509023 PDHBP11177 359 aa17.27■□□□□ 0.36
SNCAIP-211ENST00000509023 KIF5BP33176 963 aa17.27■□□□□ 0.36
SNCAIP-211ENST00000509023 CPLX2Q6PUV4 134 aaKnown RBP17.27■□□□□ 0.36
SNCAIP-211ENST00000509023 SMARCC2Q8TAQ2 1214 aa17.27■□□□□ 0.36
SNCAIP-211ENST00000509023 ACER1Q8TDN7 264 aa17.27■□□□□ 0.36
SNCAIP-211ENST00000509023 PICK1Q9NRD5 415 aa17.27■□□□□ 0.36
SNCAIP-211ENST00000509023 PAPPA2Q9BXP8 1791 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 RAD21O60216 631 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 CDKL5O76039 1030 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 NTRK3Q16288 839 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 CMTR1Q8N1G2 835 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 ZNF408Q9H9D4 720 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 GPBP1L1Q9HC44 474 aaPredicted RBP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 OTOFQ9HC10 1997 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 TMTC3Q6ZXV5 915 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 SYNPO2Q9UMS6 1093 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 TMX2Q9Y320 296 aa17.26■□□□□ 0.35
SNCAIP-211ENST00000509023 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 IFNAR1P17181 557 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 PTPRAP18433 802 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 DDIT3P35638 169 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 VGLL4Q14135 290 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 MOB2Q70IA6 237 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 GMCL1P1Q8NEA9 526 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 PHKBQ93100 1093 aa17.25■□□□□ 0.35
SNCAIP-211ENST00000509023 FRMPD2Q68DX3 1309 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 F5H6K3 240 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 KLRC3Q07444 240 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 CSADQ9Y600 493 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 SNCAIPQ9Y6H5 919 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 ZYXQ15942 572 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 FEZ1Q99689 392 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 GOPCQ9HD26 462 aa17.24■□□□□ 0.35
SNCAIP-211ENST00000509023 NDUFB10O96000 172 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 FDPSP14324 419 aaKnown RBP17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 SLC1A4P43007 532 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 GNAQP50148 359 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 ANKRD13AQ8IZ07 590 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 SRBD1Q8N5C6 995 aaKnown RBP17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 DCAF4Q8WV16 495 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
SNCAIP-211ENST00000509023 KLRF2D3W0D1 207 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 FUT2Q10981 343 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 ORC3Q9UBD5 711 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 ZHX2Q9Y6X8 837 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 CNTNAP5Q8WYK1 1306 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 GPATCH4Q5T3I0 446 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 TRIM22Q8IYM9 498 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms