RNA–Protein interactions for RNA: ENST00000508769.1

SIMC1-210, Transcript of SUMO interacting motifs containing 1, human

TSL 3

Gene SIMC1, Length 461 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIMC1-210	ENST00000508769	C16orf86	Q6ZW13	317 aa		27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	KBTBD3	Q8NAB2	608 aa		27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	OSBP2	Q969R2	916 aa		27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	GPATCH3	Q96I76	525 aa		27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	PAWR	Q96IZ0	340 aa	Known RBP	27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	STRBP	Q96SI9	672 aa	Known RBP	27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	HMX1	Q9NP08	348 aa	Predicted RBP	27.96	■■■□□ 2.07
SIMC1-210	ENST00000508769	XRCC5	P13010	732 aa	Known RBP	27.95	■■■□□ 2.06
SIMC1-210	ENST00000508769	CCAR1	Q8IX12	1150 aa	Known RBP	27.95	■■■□□ 2.06
SIMC1-210	ENST00000508769	SPICE1	Q8N0Z3	855 aa		27.95	■■■□□ 2.06
SIMC1-210	ENST00000508769	HTATIP2	Q9BUP3	242 aa		27.95	■■■□□ 2.06
SIMC1-210	ENST00000508769	FLRT1	Q9NZU1	646 aa		27.95	■■■□□ 2.06
SIMC1-210	ENST00000508769	ZKSCAN1	P17029	563 aa	Predicted RBP	27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	ICA1	Q05084	483 aa		27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	CACNB2	Q08289	660 aa	Predicted RBP	27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	HDAC1	Q13547	482 aa	Predicted RBP	27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	WDR78	Q5VTH9	848 aa		27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	ZSCAN25	Q6NSZ9	544 aa		27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	STK11IP	Q8N1F8	1099 aa		27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	TANGO6	Q9C0B7	1094 aa		27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	RANBP2	P49792	3224 aa	Known RBP	27.94	■■■□□ 2.06
SIMC1-210	ENST00000508769	CCND3	P30281	292 aa	Predicted RBP	27.93	■■■□□ 2.06
SIMC1-210	ENST00000508769	RGS2	P41220	211 aa		27.93	■■■□□ 2.06
SIMC1-210	ENST00000508769	MAP2K5	Q13163	448 aa		27.93	■■■□□ 2.06
SIMC1-210	ENST00000508769	CHRDL2	Q6WN34	429 aa		27.93	■■■□□ 2.06
SIMC1-210	ENST00000508769	APBA2	Q99767	749 aa		27.93	■■■□□ 2.06
SIMC1-210	ENST00000508769	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	27.93	■■■□□ 2.06
SIMC1-210	ENST00000508769	GSG1L2	A8MUP6	293 aa		27.92	■■■□□ 2.06
SIMC1-210	ENST00000508769		M0R2C6	588 aa		27.92	■■■□□ 2.06
SIMC1-210	ENST00000508769	ANKRD45	Q5TZF3	282 aa		27.92	■■■□□ 2.06
SIMC1-210	ENST00000508769	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	27.92	■■■□□ 2.06
SIMC1-210	ENST00000508769	TMX2	Q9Y320	296 aa		27.92	■■■□□ 2.06
SIMC1-210	ENST00000508769	PTPRE	P23469	700 aa		27.91	■■■□□ 2.06
SIMC1-210	ENST00000508769	FXR1	P51114	621 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
SIMC1-210	ENST00000508769	PI4K2B	Q8TCG2	481 aa		27.91	■■■□□ 2.06
SIMC1-210	ENST00000508769	APPBP2	Q92624	585 aa		27.91	■■■□□ 2.06
SIMC1-210	ENST00000508769	CWC22	Q9HCG8	908 aa	Known RBP	27.91	■■■□□ 2.06
SIMC1-210	ENST00000508769	RNF113A	O15541	343 aa	Known RBP	27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	CCNA1	P78396	465 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	COG2	Q14746	738 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	NPLOC4	Q8TAT6	608 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	ATG4C	Q96DT6	458 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	MOV10L1	Q9BXT6	1211 aa	Known RBP	27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	VCPKMT	Q9H867	229 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	ARHGEF10L	Q9HCE6	1279 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	ZNF236	Q9UL36	1845 aa		27.9	■■■□□ 2.06
SIMC1-210	ENST00000508769	EEF2	P13639	858 aa	Known RBP	27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	ATP2B2	Q01814	1243 aa		27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	GRB14	Q14449	540 aa		27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	DDRGK1	Q96HY6	314 aa		27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	CCDC17	Q96LX7	622 aa		27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	PCDH10	Q9P2E7	1040 aa		27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	OGDHL	Q9ULD0	1010 aa		27.89	■■■□□ 2.06
SIMC1-210	ENST00000508769	ZNFX1	Q9P2E3	1918 aa	Known RBP	27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	SLC15A5	A6NIM6	579 aa		27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	GPAA1	O43292	621 aa		27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	AMOTL1	Q8IY63	956 aa		27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	SEC62	Q99442	399 aa	Known RBP	27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	RBM27	Q9P2N5	1060 aa	Known RBP	27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	MYH4	Q9Y623	1939 aa		27.88	■■■□□ 2.05
SIMC1-210	ENST00000508769	DSG3	P32926	999 aa		27.87	■■■□□ 2.05
SIMC1-210	ENST00000508769	NECAB2	Q7Z6G3	386 aa		27.87	■■■□□ 2.05
SIMC1-210	ENST00000508769	SPATC1L	Q9H0A9	340 aa		27.87	■■■□□ 2.05
SIMC1-210	ENST00000508769	FBXO28	Q9NVF7	368 aa		27.87	■■■□□ 2.05
SIMC1-210	ENST00000508769	MINDY4B	A8MYZ0	360 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	FLOT1	O75955	427 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	RASA1	P20936	1047 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	SBK1	Q52WX2	424 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	LHX8	Q68G74	356 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	LPAR1	Q92633	364 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	ROBO3	Q96MS0	1386 aa		27.86	■■■□□ 2.05
SIMC1-210	ENST00000508769	EVI5	O60447	810 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	ERCC3	P19447	782 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	TRMT44	Q8IYL2	757 aa	Known RBP	27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	ANKLE1	Q8NAG6	615 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	PRO3102	Q9H379	93 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	HOXC10	Q9NYD6	342 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	PFAS	O15067	1338 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	TTC41P	Q6P2S7	1318 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	SALL3	Q9BXA9	1300 aa		27.85	■■■□□ 2.05
SIMC1-210	ENST00000508769	GLRX3	O76003	335 aa	Known RBP	27.84	■■■□□ 2.05
SIMC1-210	ENST00000508769	IVNS1ABP	Q9Y6Y0	642 aa		27.84	■■■□□ 2.05
SIMC1-210	ENST00000508769	ERC2	O15083	957 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	WDR46	O15213	610 aa	Known RBP	27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	HOXC6	P09630	235 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	CYP2C19	P33261	490 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	PLS1	Q14651	629 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	B4GALNT3	Q6L9W6	998 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	TRPV1	Q8NER1	839 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	SH2D4A	Q9H788	454 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	KANSL2	Q9H9L4	492 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	NR2E3	Q9Y5X4	410 aa		27.83	■■■□□ 2.05
SIMC1-210	ENST00000508769	SZT2	Q5T011	3432 aa		27.82	■■■□□ 2.04
SIMC1-210	ENST00000508769	PRDM1	O75626	825 aa		27.82	■■■□□ 2.04
SIMC1-210	ENST00000508769	IGHA2	P01877	340 aa		27.82	■■■□□ 2.04
SIMC1-210	ENST00000508769	ZFY	P08048	801 aa	Predicted RBP	27.82	■■■□□ 2.04
SIMC1-210	ENST00000508769	CAPN2	P17655	700 aa		27.82	■■■□□ 2.04
SIMC1-210	ENST00000508769	ADORA2A	P29274	412 aa		27.82	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms