RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GCLCP48506 637 aaPredicted RBP10.78□□□□□ -0.68
NUP54-207ENST00000508583 JAG1P78504 1218 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 CRHR2Q13324 411 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 SART3Q15020 963 aaKnown RBP10.78□□□□□ -0.68
NUP54-207ENST00000508583 CEP95Q96GE4 821 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 TTC14Q96N46 770 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
NUP54-207ENST00000508583 IL25Q9H293 177 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 VCPKMTQ9H867 229 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 TCP11L1Q9NUJ3 509 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
NUP54-207ENST00000508583 IGKV6D-41A0A0C4DH26 115 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 ERICH2A1L162 156 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 WDR46O15213 610 aaKnown RBP10.77□□□□□ -0.69
NUP54-207ENST00000508583 TLR2O60603 784 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 HSPA8P11142 646 aaKnown RBP10.77□□□□□ -0.69
NUP54-207ENST00000508583 VCAM1P19320 739 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 MCCP23508 829 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 LBX1P52954 281 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 PTH1RQ03431 593 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 MOGSQ13724 837 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 KRT32Q14532 448 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 KIF22Q14807 665 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.69
NUP54-207ENST00000508583 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 GPAT2Q6NUI2 795 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 TBC1D10CQ8IV04 446 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 NCOA7Q8NI08 942 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 ACER1Q8TDN7 264 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 MKL1Q969V6 931 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 UBAC1Q9BSL1 405 aa10.77□□□□□ -0.69
NUP54-207ENST00000508583 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 GPR25O00155 361 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 RAD21O60216 631 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 FKTNO75072 461 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 TBC1D8O95759 1140 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 CYP21A2P08686 494 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 TREML2Q5T2D2 321 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 DGKHQ86XP1 1220 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 GMCL1P1Q8NEA9 526 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 ERO1AQ96HE7 468 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
NUP54-207ENST00000508583 TANGO6Q9C0B7 1094 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 ASCC2Q9H1I8 757 aaPredicted RBP10.76□□□□□ -0.69
NUP54-207ENST00000508583 RPAP3Q9H6T3 665 aaPredicted RBP10.76□□□□□ -0.69
NUP54-207ENST00000508583 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 HOXC10Q9NYD6 342 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 CLIP2Q9UDT6 1046 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 NEDD4P46934 1319 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 MYPNQ86TC9 1320 aa10.76□□□□□ -0.69
NUP54-207ENST00000508583 A0A1W2PRG0 241 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 B4E1Z4 1266 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 KDM4AO75164 1064 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 GNRH1P01148 92 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 TOP1P11387 765 aaKnown RBP10.75□□□□□ -0.69
NUP54-207ENST00000508583 SP3Q02447 781 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 DGKZQ13574 1117 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 FAM110CQ1W6H9 321 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 MB21D1Q8N884 522 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 MTA3Q9BTC8 594 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
NUP54-207ENST00000508583 E7EWF7 191 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 F5H6K3 240 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 SLC27A2O14975 620 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 FLOT1O75955 427 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
NUP54-207ENST00000508583 CYP2C8P10632 490 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 NOVP48745 357 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
NUP54-207ENST00000508583 HERVK_113P62684 666 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 CCNA1P78396 465 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 KLRC3Q07444 240 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 COG2Q14746 738 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 NECTIN1Q15223 517 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 RCSD1Q6JBY9 416 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 CATSPERGQ6ZRH7 1159 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 CLEC10AQ8IUN9 316 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 SIAH1Q8IUQ4 282 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 CCAR1Q8IX12 1150 aaKnown RBP10.74□□□□□ -0.69
NUP54-207ENST00000508583 GMCL1Q96IK5 515 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
NUP54-207ENST00000508583 R3HDMLQ9H3Y0 253 aa10.74□□□□□ -0.69
NUP54-207ENST00000508583 NDUFB10O96000 172 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 FDX1P10109 184 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 HOXD10P28358 340 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 MCM5P33992 734 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 SLC1A4P43007 532 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 PKN2Q16513 984 aaKnown RBP10.73□□□□□ -0.69
NUP54-207ENST00000508583 IFIT1BQ5T764 474 aaKnown RBP10.73□□□□□ -0.69
NUP54-207ENST00000508583 SLFN13Q68D06 897 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 C17orf99Q6UX52 265 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 SPICE1Q8N0Z3 855 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
NUP54-207ENST00000508583 ZNF296Q8WUU4 475 aaPredicted RBP10.73□□□□□ -0.69
NUP54-207ENST00000508583 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
NUP54-207ENST00000508583 INCENPQ9NQS7 918 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms