RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580	RNF141	Q8WVD5	230 aa		6.15	□□□□□ -1.42
DDX4-208	ENST00000508580	TRIT1	Q9H3H1	467 aa	Known RBP	6.15	□□□□□ -1.42
DDX4-208	ENST00000508580	GPATCH2	Q9NW75	528 aa		6.15	□□□□□ -1.42
DDX4-208	ENST00000508580	UBP1	Q9NZI7	540 aa		6.15	□□□□□ -1.42
DDX4-208	ENST00000508580	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.15	□□□□□ -1.42
DDX4-208	ENST00000508580	RGS13	O14921	159 aa		6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	ATE1	O95260	518 aa		6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	ZNF16	P17020	682 aa	Predicted RBP	6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	TRHR	P34981	398 aa	Predicted RBP	6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	ITGAE	P38570	1179 aa		6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	CWF19L2	Q2TBE0	894 aa	Known RBP	6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	ARSH	Q5FYA8	562 aa		6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	FAM84A	Q96KN4	292 aa		6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	DUSP13	Q9UII6	198 aa		6.14	□□□□□ -1.43
DDX4-208	ENST00000508580	SHISA3	A0PJX4	238 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	UBOX5	O94941	541 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	JAG1	P78504	1218 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	CLC	Q05315	142 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	EGR3	Q06889	387 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	SEZ6	Q53EL9	994 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	HS2ST1	Q7LGA3	356 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	KSR1	Q8IVT5	923 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	TMEM87A	Q8NBN3	555 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	ABHD4	Q8TB40	342 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	CCDC120	Q96HB5	630 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	LRRC3	Q9BY71	257 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	EHMT1	Q9H9B1	1298 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	SP110	Q9HB58	689 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	TMEM59L	Q9UK28	342 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	PCDHA11	Q9Y5I1	949 aa		6.13	□□□□□ -1.43
DDX4-208	ENST00000508580	MPZL3	Q6UWV2	235 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	MYLIP	Q8WY64	445 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	ATG4C	Q96DT6	458 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	BACH2	Q9BYV9	841 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	ANTXR1	Q9H6X2	564 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	C19orf44	Q9H6X5	657 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	EBF1	Q9UH73	591 aa		6.12	□□□□□ -1.43
DDX4-208	ENST00000508580	RBM47	A0AV96	593 aa	Known RBP	6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	HPX	P02790	462 aa		6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	ZGLP1	P0C6A0	271 aa		6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	CDCP2	Q5VXM1	449 aa		6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	GK5	Q6ZS86	529 aa		6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	USHBP1	Q8N6Y0	703 aa		6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	EAF1	Q96JC9	268 aa	Predicted RBP	6.11	□□□□□ -1.43
DDX4-208	ENST00000508580	LOC105371045	A0A1W2PR82	267 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	DBX1	A6NMT0	343 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	RAG1	P15918	1043 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	POLR2B	P30876	1174 aa	Known RBP	6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	MCM4	P33991	863 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	MLEC	Q14165	292 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	TMCO4	Q5TGY1	634 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	DIRC2	Q96SL1	478 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	SLC38A3	Q99624	504 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	ASPN	Q9BXN1	380 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	CNNM2	Q9H8M5	875 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	GMIP	Q9P107	970 aa		6.1	□□□□□ -1.43
DDX4-208	ENST00000508580	RAC2	P15153	192 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	LTK	P29376	864 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	APOBR	Q0VD83	1088 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	CLEC16A	Q2KHT3	1053 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	NBPF9	Q3BBW0	867 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	TIGD5	Q53EQ6	642 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	SLITRK4	Q8IW52	837 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	REXO1	Q8N1G1	1221 aa	Known RBP	6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	NKD1	Q969G9	470 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	NT5C1A	Q9BXI3	368 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	NSUN3	Q9H649	340 aa	Known RBP	6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	ZNF281	Q9Y2X9	895 aa		6.09	□□□□□ -1.43
DDX4-208	ENST00000508580	KRTAP4-8	A0A0G2JLE6	195 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	KRT1	P04264	644 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	CHMP4BP1	P59074	171 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	TEK	Q02763	1124 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	SNW1	Q13573	536 aa	Known RBP	6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	PKN1	Q16512	942 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	OVOS1	Q6IE37	1185 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	TMC3	Q7Z5M5	1100 aa		6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	ENOX1	Q8TC92	643 aa	Known RBP	6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
DDX4-208	ENST00000508580	ZNF165	P49910	485 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	NMI	Q13287	307 aa	Predicted RBP	6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	CILP2	Q8IUL8	1156 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	TMEM192	Q8IY95	271 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	PDZD8	Q8NEN9	1154 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	LINC01599	Q8WXQ3	324 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	SPON2	Q9BUD6	331 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	RNF32	Q9H0A6	362 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	MINPP1	Q9UNW1	487 aa		6.07	□□□□□ -1.44
DDX4-208	ENST00000508580	C1QTNF9	P0C862	333 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	NME1	P15531	152 aa	Known RBP	6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	RAP1GAP	P47736	663 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	MFAP1	P55081	439 aa	Known RBP	6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	NLRC3	Q7RTR2	1065 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	DAGLB	Q8NCG7	672 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	TCTN2	Q96GX1	697 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	SLC9A7	Q96T83	725 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	G6PC3	Q9BUM1	346 aa		6.06	□□□□□ -1.44
DDX4-208	ENST00000508580	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.06	□□□□□ -1.44

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