RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 SMC1BQ8NDV3 1235 aa16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 FEZ1Q99689 392 aa16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 WDR18Q9BV38 432 aa16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 TROAPQ12815 778 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 SEPT2Q15019 361 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 FAM184AQ8NB25 1140 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 TMX2Q9Y320 296 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
HMGCLL1-208ENST00000508459 PAPPA2Q9BXP8 1791 aa16.77■□□□□ 0.27
HMGCLL1-208ENST00000508459 MYH4Q9Y623 1939 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 STK36Q9NRP7 1315 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 ATAD5Q96QE3 1844 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 ADM5C9JUS6 153 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 GDF11O95390 407 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 FDX1P10109 184 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 IFNAR1P17181 557 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 GRM4Q14833 912 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 NOL8Q76FK4 1167 aaKnown RBP16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 KIAA1683Q9H0B3 1180 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 UTRNP46939 3433 aa16.76■□□□□ 0.27
HMGCLL1-208ENST00000508459 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 hCG_1984214I3L0E3 225 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 SLC1A4P43007 532 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 NUCB2P80303 420 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 PPATQ06203 517 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 ERO1BQ86YB8 467 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 ZNF713Q8N859 430 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 RNF26Q9BY78 433 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 NMRK2Q9NPI5 230 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
HMGCLL1-208ENST00000508459 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 PLA2G6O60733 806 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 CD2BP2O95400 341 aaKnown RBP16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 SNHG28P0DPA3 235 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 SCRN1Q12765 414 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 FSTL1Q12841 308 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 TRIM29Q14134 588 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 SPZ1Q9BXG8 430 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 VCPKMTQ9H867 229 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 TMOD4Q9NZQ9 345 aa16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
HMGCLL1-208ENST00000508459 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 CXCL11O14625 94 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 NMT2O60551 498 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 DEXIO95424 95 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 PTPRAP18433 802 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 EVX2Q03828 476 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 STK3Q13188 491 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 SLFN13Q68D06 897 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 USP17L2Q6R6M4 530 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 GBA2Q9HCG7 927 aaPredicted RBP16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
HMGCLL1-208ENST00000508459 TRPM7Q96QT4 1865 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 F5H6K3 240 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 TOMM70O94826 608 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 PDHBP11177 359 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 KLRC3Q07444 240 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 ZNF526Q8TF50 670 aaPredicted RBP16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 GLT8D2Q9H1C3 349 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 FEM1BQ9UK73 627 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
HMGCLL1-208ENST00000508459 KLRF2D3W0D1 207 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 BMP3P12645 472 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 GUCY1A2P33402 732 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 BACE1P56817 501 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 PPIL2Q13356 520 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 VGLL4Q14135 290 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 CCDC96Q2M329 555 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 FASTKD5Q7L8L6 764 aaKnown RBP16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 SSC5DA1L4H1 1573 aa16.71■□□□□ 0.27
HMGCLL1-208ENST00000508459 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 SPDYE5A6NIY4 337 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 PRPF3O43395 683 aaKnown RBP16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 CELF2O95319 508 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms