RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 MIPEPQ99797 713 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 YIPF2Q9BWQ6 316 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 CCDC113Q9H0I3 377 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 KCNF1Q9H3M0 494 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 PHAXQ9H814 394 aaKnown RBP5.27□□□□□ -1.57
LSM6-205ENST00000507449 PRDM10Q9NQV6 1147 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 SUCOQ9UBS9 1254 aaKnown RBP5.27□□□□□ -1.57
LSM6-205ENST00000507449 CEP131Q9UPN4 1083 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 SLC12A7Q9Y666 1083 aa5.27□□□□□ -1.57
LSM6-205ENST00000507449 HMX2A2RU54 273 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 U2SURPO15042 1029 aaKnown RBP5.26□□□□□ -1.57
LSM6-205ENST00000507449 SMARCA5O60264 1052 aaPredicted RBP5.26□□□□□ -1.57
LSM6-205ENST00000507449 DDAH1O94760 285 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 ADMP35318 185 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 NFKBIBQ15653 356 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 TDRD10Q5VZ19 366 aaKnown RBP5.26□□□□□ -1.57
LSM6-205ENST00000507449 VHLLQ6RSH7 139 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 FAM214BQ7L5A3 538 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 LRP10Q7Z4F1 713 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 CDH24Q86UP0 819 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 CLEC10AQ8IUN9 316 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 NLGN1Q8N2Q7 840 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 TOP6BLQ8N6T0 577 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 TP53INP1Q96A56 240 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 ZNF512BQ96KM6 892 aaPredicted RBP5.26□□□□□ -1.57
LSM6-205ENST00000507449 FAM83CQ9BQN1 747 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 DUSP23Q9BVJ7 150 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 C7orf69Q9H7B7 122 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 FAM86C1Q9NVL1 165 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 SUSD2Q9UGT4 822 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 TBX22Q9Y458 520 aa5.26□□□□□ -1.57
LSM6-205ENST00000507449 SHOXO15266 292 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 PDPK1O15530 556 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 CBFA2T2O43439 604 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 GBP1P32455 592 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 SLC7A5Q01650 507 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 RASGRF1Q13972 1273 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 NFE2L2Q16236 605 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 AXDND1Q5T1B0 1012 aaPredicted RBP5.25□□□□□ -1.57
LSM6-205ENST00000507449 NBPF12Q5TAG4 269 aaPredicted RBP5.25□□□□□ -1.57
LSM6-205ENST00000507449 KIAA1211LQ6NV74 962 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 PAOXQ6QHF9 649 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 KREMEN1Q96MU8 473 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
LSM6-205ENST00000507449 CLEC3AO75596 197 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 FAM87AP0C7U9 286 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 TAL1P17542 331 aaPredicted RBP5.24□□□□□ -1.57
LSM6-205ENST00000507449 NCAPHQ15003 741 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 GNPTABQ3T906 1256 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 PRR23CQ6ZRP0 262 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 SPATC1Q76KD6 591 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 ZAR1Q86SH2 424 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 LILRB2Q8N423 598 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 ZNF513Q8N8E2 541 aaPredicted RBP5.24□□□□□ -1.57
LSM6-205ENST00000507449 MRFAP1L1Q96HT8 127 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 DNAJC7Q99615 494 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.24□□□□□ -1.57
LSM6-205ENST00000507449 KANSL2Q9H9L4 492 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 MRPL42Q9Y6G3 142 aaKnown RBP5.24□□□□□ -1.57
LSM6-205ENST00000507449 U3KQE9 123 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 SHROOM4Q9ULL8 1493 aa5.24□□□□□ -1.57
LSM6-205ENST00000507449 TLDC2A0PJX2 215 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 SUSD5O60279 629 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 DIAPH1O60610 1272 aaKnown RBP5.23□□□□□ -1.57
LSM6-205ENST00000507449 LRRN2O75325 713 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 TP53P04637 393 aaPredicted RBP5.23□□□□□ -1.57
LSM6-205ENST00000507449 SLC10A6Q3KNW5 377 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 DCAF15Q66K64 600 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 DHRS1Q96LJ7 313 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 HEXIM2Q96MH2 286 aaKnown RBP5.23□□□□□ -1.57
LSM6-205ENST00000507449 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
LSM6-205ENST00000507449 CADPSQ9ULU8 1353 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 FAM170BA6NMN3 283 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 EPHX1P07099 455 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 OGFOD3Q6PK18 319 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 ST13P5Q8NFI4 369 aaPredicted RBP5.22□□□□□ -1.57
LSM6-205ENST00000507449 RNF141Q8WVD5 230 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 RNPC3Q96LT9 517 aaKnown RBP5.22□□□□□ -1.57
LSM6-205ENST00000507449 Q96M66 194 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 MFSD14AQ96MC6 490 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 FBXL18Q96ME1 805 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 TBC1D32Q96NH3 1257 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 HAUS7Q99871 368 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 KLHL25Q9H0H3 589 aa5.22□□□□□ -1.57
LSM6-205ENST00000507449 PRR33A8MZF0 331 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 F13BP05160 661 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 ETV3P41162 512 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 JAG1P78504 1218 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 SNW1Q13573 536 aaKnown RBP5.21□□□□□ -1.58
LSM6-205ENST00000507449 NBPF9Q3BBW0 867 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 BBS9Q3SYG4 887 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 MTERF2Q49AM1 385 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 RNF43Q68DV7 783 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 ZNF765Q7L2R6 523 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 EEPD1Q7L9B9 569 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 SLC51AQ86UW1 340 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 CCDC144CPQ8IYA2 1237 aa5.21□□□□□ -1.58
LSM6-205ENST00000507449 FAM177A1Q8N128 213 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms