RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 NEDD1Q8NHV4 660 aa16.12■□□□□ 0.17
PDCD6-204ENST00000506909 GTF3C2Q8WUA4 911 aaPredicted RBP16.12■□□□□ 0.17
PDCD6-204ENST00000506909 VCPKMTQ9H867 229 aa16.12■□□□□ 0.17
PDCD6-204ENST00000506909 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
PDCD6-204ENST00000506909 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
PDCD6-204ENST00000506909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.174e-6■■■■□ 21.8
PDCD6-204ENST00000506909 PLIN4Q96Q06 1357 aa16.12■□□□□ 0.17
PDCD6-204ENST00000506909 COL11A1P12107 1806 aaPredicted RBP16.11■□□□□ 0.17
PDCD6-204ENST00000506909 HOXD10P28358 340 aa16.11■□□□□ 0.17
PDCD6-204ENST00000506909 TRIM47Q96LD4 638 aa16.11■□□□□ 0.17
PDCD6-204ENST00000506909 DSCC1Q9BVC3 393 aa16.11■□□□□ 0.17
PDCD6-204ENST00000506909 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
PDCD6-204ENST00000506909 ORC4O43929 436 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 FMNL1O95466 1100 aaPredicted RBP16.1■□□□□ 0.17
PDCD6-204ENST00000506909 TSPY3P0CV98 308 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 TSPY8P0CW00 308 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 CHMLP26374 656 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 FCGRTP55899 365 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 LBX2Q6XYB7 198 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 MKL1Q969V6 931 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 RBPJLQ9UBG7 517 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 RAD50Q92878 1312 aa16.1■□□□□ 0.17
PDCD6-204ENST00000506909 A0A0G2JMZ2 1700 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 WDR46O15213 610 aaKnown RBP16.09■□□□□ 0.17
PDCD6-204ENST00000506909 PCP11498 1178 aaKnown RBP16.09■□□□□ 0.17
PDCD6-204ENST00000506909 TFAP4Q01664 338 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 COG2Q14746 738 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 ERICH6BQ5W0A0 696 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 GOPCQ9HD26 462 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 SRRDQ9UH36 339 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 SYNPO2Q9UMS6 1093 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 TACC3Q9Y6A5 838 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 PLXNB2O15031 1838 aa16.09■□□□□ 0.17
PDCD6-204ENST00000506909 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
PDCD6-204ENST00000506909 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 POTEEQ6S8J3 1075 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 GPRC5AQ8NFJ5 357 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 CEP95Q96GE4 821 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 IL25Q9H293 177 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 INCENPQ9NQS7 918 aa16.08■□□□□ 0.16
PDCD6-204ENST00000506909 RBBP6Q7Z6E9 1792 aaKnown RBP16.08■□□□□ 0.16
PDCD6-204ENST00000506909 TSPY2A6NKD2 308 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
PDCD6-204ENST00000506909 ZNF213O14771 459 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 TNPO2O14787 897 aaKnown RBP16.07■□□□□ 0.16
PDCD6-204ENST00000506909 TTLL1O95922 423 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 AKNAD1Q5T1N1 836 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 SPICE1Q8N0Z3 855 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 CLIP2Q9UDT6 1046 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 PTCH2Q9Y6C5 1203 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 MYPNQ86TC9 1320 aa16.07■□□□□ 0.16
PDCD6-204ENST00000506909 F5H6K3 240 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
PDCD6-204ENST00000506909 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
PDCD6-204ENST00000506909 NT5C2P49902 561 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 HAND2P61296 217 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 ERVK-9P63128 1117 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 ERVK-24P63145 666 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 KLRC3Q07444 240 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 Q3C1V9 767 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 COA7Q96BR5 231 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 NBPF3Q9H094 633 aa16.06■□□□□ 0.16
PDCD6-204ENST00000506909 RNF41Q9H4P4 317 aaPredicted RBP16.06■□□□□ 0.16
PDCD6-204ENST00000506909 KIAA0100Q14667 2235 aaKnown RBP16.05■□□□□ 0.16
PDCD6-204ENST00000506909 SGSM2O43147 1006 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 CNMDO75829 334 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 DSG3P32926 999 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 NOVP48745 357 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
PDCD6-204ENST00000506909 GMCL1P1Q8NEA9 526 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 ARMC5Q96C12 935 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 PAGR1Q9BTK6 254 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 TCP11L1Q9NUJ3 509 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 HTTP42858 3142 aa16.05■□□□□ 0.16
PDCD6-204ENST00000506909 PEX10O60683 326 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 FLOT1O75955 427 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 MAPK4P31152 587 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 CCNA1P78396 465 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 PRKCZQ05513 592 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 IRF5Q13568 498 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 SLC9C1Q4G0N8 1177 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
PDCD6-204ENST00000506909 MB21D1Q8N884 522 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms