RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 OSBPP22059 807 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 SMARCA1P28370 1054 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 GUCY1A2P33402 732 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 KIF23Q02241 960 aaPredicted RBP9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L24Q0WX57 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 SPP2Q13103 211 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 PRKG1Q13976 671 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 SEPT2Q15019 361 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 RAB3GAP1Q15042 981 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 CCL15Q16663 113 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 PAXIP1Q6ZW49 1069 aaPredicted RBP9.95□□□□□ -0.82
PDGFC-205ENST00000506880 MOB2Q70IA6 237 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 FAM160B2Q86V87 743 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 DCAF4Q8WV16 495 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 DYNLL2Q96FJ2 89 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 FEZ1Q99689 392 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP26Q9BXU7 913 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 ZFYVE28Q9HCC9 887 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 SCAF8Q9UPN6 1271 aaKnown RBP9.95□□□□□ -0.82
PDGFC-205ENST00000506880 PARP14Q460N5 1801 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 GJA5P36382 358 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 OAZ1P54368 228 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 PRMT2P55345 433 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 DHX32Q7L7V1 743 aaKnown RBP9.94□□□□□ -0.82
PDGFC-205ENST00000506880 SGMS1Q86VZ5 419 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 TBC1D10CQ8IV04 446 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 SLC44A5Q8NCS7 719 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 CHURC1Q8WUH1 139 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 CEP95Q96GE4 821 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 ZSCAN10Q96SZ4 725 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-205ENST00000506880 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.94□□□□□ -0.82
PDGFC-205ENST00000506880 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 IL25Q9H293 177 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 ALDH8A1Q9H2A2 487 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-205ENST00000506880 ZSWIM5Q9P217 1185 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 FEM1BQ9UK73 627 aa9.94□□□□□ -0.82
PDGFC-205ENST00000506880 CYP2D7A0A087X1C5 515 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 ATP2A1O14983 1001 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 TLR2O60603 784 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 GDF11O95390 407 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 MYCNP04198 464 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 EEF2P13639 858 aaKnown RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 CAPN2P17655 700 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 CTCFP49711 727 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 GNAQP50148 359 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 IRX3P78415 501 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 MTMR2Q13614 643 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 MOGSQ13724 837 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 RRP1BQ14684 758 aaKnown RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 FAM110CQ1W6H9 321 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 ASPRV1Q53RT3 343 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 DLK2Q6UY11 383 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 MB21D2Q8IYB1 491 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-205ENST00000506880 BRI3BPQ8WY22 251 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 NEK1Q96PY6 1258 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 LZTS2Q9BRK4 669 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 AGXT2Q9BYV1 514 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 TOMM22Q9NS69 142 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 CASP8AP2Q9UKL3 1982 aa9.93□□□□□ -0.82
PDGFC-205ENST00000506880 PCNTO95613 3336 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 RLFQ13129 1914 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 CCDC196A0A1B0GTZ2 297 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 TRIM75PA6NK02 468 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 FAM196BA6NMK8 535 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 KDM4AO75164 1064 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 DDAH1O94760 285 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 VCAM1P19320 739 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 KIF5BP33176 963 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 HMGCS2P54868 508 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 HAND2P61296 217 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 CCNA1P78396 465 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 COG2Q14746 738 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 IFIT1BQ5T764 474 aaKnown RBP9.92□□□□□ -0.82
PDGFC-205ENST00000506880 BTNL9Q6UXG8 535 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 CATSPERGQ6ZRH7 1159 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDGFC-205ENST00000506880 SAMD3Q8N6K7 520 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 PRPF38AQ8NAV1 312 aaKnown RBP9.92□□□□□ -0.82
PDGFC-205ENST00000506880 KAT14Q9H8E8 782 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
PDGFC-205ENST00000506880 MORF4L1Q9UBU8 362 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 ADAMTS5Q9UNA0 930 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 STX8Q9UNK0 236 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 A0A0G2JMZ2 1700 aa9.92□□□□□ -0.82
PDGFC-205ENST00000506880 NID2Q14112 1375 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 TNKSO95271 1327 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 NEDD4P46934 1319 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 B4E1Z4 1266 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 F5H6K3 240 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 PDHXO00330 501 aa9.91□□□□□ -0.82
PDGFC-205ENST00000506880 RBM25P49756 843 aaKnown RBP9.91□□□□□ -0.82
PDGFC-205ENST00000506880 STAT2P52630 851 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms