RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 LBX2Q6XYB7 198 aa19.61■□□□□ 0.73
SNX2-205ENST00000506874 TANGO6Q9C0B7 1094 aa19.61■□□□□ 0.73
SNX2-205ENST00000506874 CHMP4BQ9H444 224 aaKnown RBP19.61■□□□□ 0.73
SNX2-205ENST00000506874 PAG1Q9NWQ8 432 aa19.61■□□□□ 0.73
SNX2-205ENST00000506874 RAB11FIP3O75154 756 aa19.6■□□□□ 0.73
SNX2-205ENST00000506874 MBD4O95243 580 aa19.6■□□□□ 0.73
SNX2-205ENST00000506874 CNGA1P29973 690 aa19.6■□□□□ 0.73
SNX2-205ENST00000506874 CLEC10AQ8IUN9 316 aa19.6■□□□□ 0.73
SNX2-205ENST00000506874 NPLOC4Q8TAT6 608 aa19.6■□□□□ 0.73
SNX2-205ENST00000506874 FRMPD3Q5JV73 1810 aa19.6■□□□□ 0.73
SNX2-205ENST00000506874 COL6A1P12109 1028 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 CYP2C19P33261 490 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 BMP8BP34820 402 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 GRB14Q14449 540 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 COG2Q14746 738 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 LRRC26Q2I0M4 334 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
SNX2-205ENST00000506874 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
SNX2-205ENST00000506874 CYP2D7A0A087X1C5 515 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 AKR1B1P15121 316 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 ADD2P35612 726 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 TMEM179Q6ZVK1 233 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 DPP9Q86TI2 863 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 MOV10L1Q9BXT6 1211 aaKnown RBP19.58■□□□□ 0.72
SNX2-205ENST00000506874 HOXC10Q9NYD6 342 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 SWAP70Q9UH65 585 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 LAMA3Q16787 3333 aa19.58■□□□□ 0.72
SNX2-205ENST00000506874 SMIM22K7EJ46 135 aa19.57■□□□□ 0.72
SNX2-205ENST00000506874 CHGBP05060 677 aa19.57■□□□□ 0.72
SNX2-205ENST00000506874 HOXC6P09630 235 aa19.57■□□□□ 0.72
SNX2-205ENST00000506874 PLS1Q14651 629 aa19.57■□□□□ 0.72
SNX2-205ENST00000506874 SPICE1Q8N0Z3 855 aa19.57■□□□□ 0.72
SNX2-205ENST00000506874 UBE2OQ9C0C9 1292 aaKnown RBP19.57■□□□□ 0.72
SNX2-205ENST00000506874 SENP6Q9GZR1 1112 aaPredicted RBP19.57■□□□□ 0.72
SNX2-205ENST00000506874 DDX20Q9UHI6 824 aaKnown RBP19.57■□□□□ 0.72
SNX2-205ENST00000506874 RLFQ13129 1914 aa19.57■□□□□ 0.72
SNX2-205ENST00000506874 ATP5JP18859 108 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 ICA1Q05084 483 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 TRPV1Q8NER1 839 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.72
SNX2-205ENST00000506874 SPATC1LQ9H0A9 340 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 ARHGEF10LQ9HCE6 1279 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 ATP8A2Q9NTI2 1148 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 MYH7P12883 1935 aa19.56■□□□□ 0.72
SNX2-205ENST00000506874 FLOT1O75955 427 aa19.55■□□□□ 0.72
SNX2-205ENST00000506874 ERCC3P19447 782 aa19.55■□□□□ 0.72
SNX2-205ENST00000506874 ADORA2AP29274 412 aa19.55■□□□□ 0.72
SNX2-205ENST00000506874 CDK8P49336 464 aa19.55■□□□□ 0.72
SNX2-205ENST00000506874 MDM2Q00987 491 aaPredicted RBP19.55■□□□□ 0.72
SNX2-205ENST00000506874 SIAH1Q8IUQ4 282 aa19.55■□□□□ 0.72
SNX2-205ENST00000506874 HAUS7Q99871 368 aa19.55■□□□□ 0.72
SNX2-205ENST00000506874 USP17L12C9JPN9 530 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 USP17L21D6R901 530 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 DSG3P32926 999 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 ATN1P54259 1190 aaPredicted RBP19.54■□□□□ 0.72
SNX2-205ENST00000506874 NCAPG2Q86XI2 1143 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 AMOTL1Q8IY63 956 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 TDHQ8IZJ6 230 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 ATG4CQ96DT6 458 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 SLC4A4Q9Y6R1 1079 aa19.54■□□□□ 0.72
SNX2-205ENST00000506874 ZNFX1Q9P2E3 1918 aaKnown RBP19.53■□□□□ 0.72
SNX2-205ENST00000506874 STRNO43815 780 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
SNX2-205ENST00000506874 MSCO60682 206 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 C12orf60Q5U649 245 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 ANO1Q5XXA6 986 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 SHCBP1Q8NEM2 672 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 LPAR1Q92633 364 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 DDRGK1Q96HY6 314 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 SH2D4AQ9H788 454 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 VCPKMTQ9H867 229 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 TMX2Q9Y320 296 aa19.53■□□□□ 0.72
SNX2-205ENST00000506874 A0A0G2JMZ2 1700 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 RAD21O60216 631 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 COBLO75128 1261 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
SNX2-205ENST00000506874 CYBAP13498 195 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 UBE3CQ15386 1083 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 GJC2Q5T442 439 aaPredicted RBP19.52■□□□□ 0.72
SNX2-205ENST00000506874 Q7L0L9 218 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 MB21D1Q8N884 522 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 CCDC17Q96LX7 622 aa19.52■□□□□ 0.72
SNX2-205ENST00000506874 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 EEF2P13639 858 aaKnown RBP19.51■□□□□ 0.71
SNX2-205ENST00000506874 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 OLFML2BQ68BL8 750 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 C16orf86Q6ZW13 317 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 DEFB123Q8N688 67 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 SLC17A8Q8NDX2 589 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 LRRCC1Q9C099 1032 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 PUS7LQ9H0K6 701 aaKnown RBP19.51■□□□□ 0.71
SNX2-205ENST00000506874 COL11A1P12107 1806 aaPredicted RBP19.51■□□□□ 0.71
SNX2-205ENST00000506874 PARP14Q460N5 1801 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 ZNF236Q9UL36 1845 aa19.51■□□□□ 0.71
SNX2-205ENST00000506874 WDR46O15213 610 aaKnown RBP19.5■□□□□ 0.71
SNX2-205ENST00000506874 LRIT3Q3SXY7 679 aa19.5■□□□□ 0.71
SNX2-205ENST00000506874 ZSCAN25Q6NSZ9 544 aa19.5■□□□□ 0.71
SNX2-205ENST00000506874 CTR9Q6PD62 1173 aa19.5■□□□□ 0.71
SNX2-205ENST00000506874 STK11IPQ8N1F8 1099 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms