RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 KRT23Q9C075 422 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 MTMR4Q9NYA4 1195 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 STX8Q9UNK0 236 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 AFG3L2Q9Y4W6 797 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 PRC1O43663 620 aa10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 CASTP20810 708 aaKnown RBP10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 MTMR2Q13614 643 aa10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 RCSD1Q6JBY9 416 aa10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 SPICE1Q8N0Z3 855 aa10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 NUP88Q99567 741 aaPredicted RBP10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 KIF2CQ99661 725 aa10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 ZNF287Q9HBT7 754 aa10.41□□□□□ -0.74
SCAMP1-202ENST00000506858 RASSF10A6NK89 507 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 DTNBO60941 627 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 SLC10A3P09131 477 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 MCCP23508 829 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 HMGCS2P54868 508 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 KIF23Q02241 960 aaPredicted RBP10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 ENAHQ8N8S7 591 aaPredicted RBP10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 ZNF280CQ8ND82 737 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 ZSCAN10Q96SZ4 725 aaPredicted RBP10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 LAMA4Q16363 1823 aa10.4□□□□□ -0.74
SCAMP1-202ENST00000506858 TNKSO95271 1327 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 PPATQ06203 517 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 PPIL2Q13356 520 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 TMEM67Q5HYA8 995 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 GADL1Q6ZQY3 521 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 NOL8Q76FK4 1167 aaKnown RBP10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 BRI3BPQ8WY22 251 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 FEZ1Q99689 392 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 PTPN18Q99952 460 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 TMEM47Q9BQJ4 181 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 UBAC1Q9BSL1 405 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 MYL10Q9BUA6 226 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 KANSL2Q9H9L4 492 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.75
SCAMP1-202ENST00000506858 MYH8P13535 1937 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 USP17L10C9JJH3 530 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 PEX10O60683 326 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 RXRAP19793 462 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 MCM5P33992 734 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 PSEN1P49768 467 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 BACE1P56817 501 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 MOGSQ13724 837 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 SEC23AQ15436 765 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 TREML2Q5T2D2 321 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 BLOC1S2Q6QNY1 142 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 Q6ZUG5 572 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 WDR18Q9BV38 432 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
SCAMP1-202ENST00000506858 DOCK1Q14185 1865 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 ATAD5Q96QE3 1844 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 CCL15-CCL14A0A0B4J2E2 113 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 TTLL1O95922 423 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 NDUFB10O96000 172 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 RPS6KB1P23443 525 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 KRT32Q14532 448 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 CCL15Q16663 113 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 IQCA1Q86XH1 822 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 CCDC102AQ96A19 550 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 TBC1D32Q96NH3 1257 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 CPVLQ9H3G5 476 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 UPF2Q9HAU5 1272 aaKnown RBP10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 NYAP2Q9P242 653 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 ISY1Q9ULR0 285 aaKnown RBP10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 TMX2Q9Y320 296 aa10.38□□□□□ -0.75
SCAMP1-202ENST00000506858 F5H6K3 240 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 IGF2BP3O00425 579 aaKnown RBP eCLIP10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 SH2B2O14492 632 aaPredicted RBP10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 EPB41L2O43491 1005 aaKnown RBP10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 GOLGA8HP0CJ92 632 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 RBM25P49756 843 aaKnown RBP10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 NEK4P51957 841 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 KLRC3Q07444 240 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 WTAPQ15007 396 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 IFIT1BQ5T764 474 aaKnown RBP10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 SLFN13Q68D06 897 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 RUFY3Q7L099 469 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 CCDC144CPQ8IYA2 1237 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 FAM43AQ8N2R8 423 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 LY9Q9HBG7 655 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 AS3MTQ9HBK9 375 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 TCP11L1Q9NUJ3 509 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 FBXO28Q9NVF7 368 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 BRPF3Q9ULD4 1205 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 NAP1L2Q9ULW6 460 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms