RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PDGFBP01127 241 aaPredicted RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 IGKV5-2P06315 115 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 CSF1RP07333 972 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 ATP2A2P16615 1042 aaKnown RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 LTBRP36941 435 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 IGHMBP2P38935 993 aaKnown RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 GYG1P46976 350 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 KCNJ4P48050 445 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 CASP7P55210 303 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 ZXDAP98168 799 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 ATP2B2Q01814 1243 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 TTLL4Q14679 1199 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 PUS10Q3MIT2 529 aaKnown RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 OLFML2BQ68BL8 750 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 LURAP1LQ8IV03 231 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 ZNF280CQ8ND82 737 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 KLHDC9Q8NEP7 349 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 LENG1Q96BZ8 264 aaPredicted RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 PLEKHF1Q96S99 279 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 PLA2G12BQ9BX93 195 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 UPF3BQ9BZI7 483 aaKnown RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 SUGCTQ9HAC7 445 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 SH2B1Q9NRF2 756 aaPredicted RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 CWC25Q9NXE8 425 aaPredicted RBP4.36□□□□□ -1.71
TCOF1-208ENST00000506063 TMOD2Q9NZR1 351 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 SLC4A7Q9Y6M7 1214 aa4.36□□□□□ -1.71
TCOF1-208ENST00000506063 MYADML2A6NDP7 307 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 DDTLA6NHG4 134 aaPredicted RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 COBLO75128 1261 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 MYCNP04198 464 aaPredicted RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 ARP10275 920 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 NUBP1P53384 320 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 ACLYP53396 1101 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 IRX5P78411 483 aaPredicted RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 PABPC4Q13310 644 aaKnown RBP eCLIP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 SMAD2Q15796 467 aaKnown RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 FBXO33Q7Z6M2 555 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 CRIPAKQ8N1N5 446 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 METTL22Q9BUU2 404 aaPredicted RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 MTIF3Q9H2K0 278 aaKnown RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 PHAXQ9H814 394 aaKnown RBP4.35□□□□□ -1.71
TCOF1-208ENST00000506063 XPNPEP3Q9NQH7 507 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 DMXL2Q8TDJ6 3036 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 IGF2RP11717 2491 aa4.35□□□□□ -1.71
TCOF1-208ENST00000506063 MICAL3Q7RTP6 2002 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 USP9XQ93008 2570 aaPredicted RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 FAM196BA6NMK8 535 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 SOBPA7XYQ1 873 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 H7C1W4 665 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 ADRB1P08588 477 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 TAL1P17542 331 aaPredicted RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 HIBADHP31937 336 aaKnown RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 IRX3P78415 501 aaPredicted RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 JAG1P78504 1218 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 DLX2Q07687 328 aaPredicted RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 SIGLEC14Q08ET2 396 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 CBX2Q14781 532 aaPredicted RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 CC2D1BQ5T0F9 858 aaKnown RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 HDGFL1Q5TGJ6 251 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 KIAA2013Q8IYS2 634 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 TMEM105Q8N8V8 129 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 PABPC5Q96DU9 382 aaKnown RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 AGBL1Q96MI9 1066 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 MPHOSPH8Q99549 860 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 TSEN34Q9BSV6 310 aaKnown RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 PAGR1Q9BTK6 254 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 NOC4LQ9BVI4 516 aaKnown RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 IDI2Q9BXS1 227 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 DDX4Q9NQI0 724 aaKnown RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 STARD7Q9NQZ5 370 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 BABAM1Q9NWV8 329 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 HYPKQ9NX55 129 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 BTBD7Q9P203 1132 aa4.34□□□□□ -1.71
TCOF1-208ENST00000506063 IQSEC3Q9UPP2 1182 aaPredicted RBP4.34□□□□□ -1.71
TCOF1-208ENST00000506063 CACNA1IQ9P0X4 2223 aa4.34□□□□□ -1.72
TCOF1-208ENST00000506063 CEP295Q9C0D2 2601 aa4.34□□□□□ -1.72
TCOF1-208ENST00000506063 DSPP15924 2871 aaKnown RBP4.33□□□□□ -1.72
TCOF1-208ENST00000506063 FOCADQ5VW36 1801 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 ELP1O95163 1332 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 MROH7Q68CQ1 1323 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 SYNRGQ9UMZ2 1314 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 LOC730098B7Z3J9 87 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 ARVCFO00192 962 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 APBB1O00213 710 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 CTAGE5O15320 804 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 MBTPS2O43462 519 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 TBC1D12O60347 775 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 KDM4AO75164 1064 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 HOXB7P09629 217 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 ZNF865P0CJ78 1059 aaPredicted RBP4.33□□□□□ -1.72
TCOF1-208ENST00000506063 ADORA2AP29274 412 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 RGS3P49796 1198 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 CCL23P55773 120 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 BACE1P56817 501 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 ERVK-21P61565 698 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 EIF4G2P78344 907 aaKnown RBP eCLIP4.33□□□□□ -1.72
TCOF1-208ENST00000506063 MTMR2Q13614 643 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 DIXDC1Q155Q3 683 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 NFE2L2Q16236 605 aa4.33□□□□□ -1.72
TCOF1-208ENST00000506063 KCNA10Q16322 511 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms