RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MOV10L1Q9BXT6 1211 aaKnown RBP12.03□□□□□ -0.48
NEDD9-210ENST00000505589 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
NEDD9-210ENST00000505589 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 MPHOSPH10O00566 681 aaKnown RBP12.02□□□□□ -0.49
NEDD9-210ENST00000505589 IGHA2P01877 340 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 CLTBP09497 229 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 ERCC3P19447 782 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 DSG3P32926 999 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 ADCYAP1R1P41586 468 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 DYNLL1P63167 89 aaKnown RBP12.02□□□□□ -0.49
NEDD9-210ENST00000505589 PLS1Q14651 629 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 TJAP1Q5JTD0 557 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 NCAPG2Q86XI2 1143 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 AMOTL1Q8IY63 956 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 MAGEB6Q8N7X4 407 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
NEDD9-210ENST00000505589 TOX2Q96NM4 488 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 DBNDD2Q9BQY9 259 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 TSEN34Q9BSV6 310 aaKnown RBP12.02□□□□□ -0.49
NEDD9-210ENST00000505589 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
NEDD9-210ENST00000505589 DIS3Q9Y2L1 958 aaKnown RBP12.02□□□□□ -0.49
NEDD9-210ENST00000505589 POLA2Q14181 598 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 LRRC41Q15345 812 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 TRIM60Q495X7 471 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 MIGA1Q8NAN2 632 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 MYLIPQ8WY64 445 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 CRNKL1Q9BZJ0 848 aaKnown RBP12.01□□□□□ -0.49
NEDD9-210ENST00000505589 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 XPNPEP3Q9NQH7 507 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 PDLIM7Q9NR12 457 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 TMEM39AQ9NV64 488 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
NEDD9-210ENST00000505589 VCANP13611 3396 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 KIAA0355O15063 1070 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 FLOT1O75955 427 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 TLE2Q04725 743 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 FPGSQ05932 587 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 KCTD2Q14681 263 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 C9orf50Q5SZB4 431 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 MSL3Q8N5Y2 521 aaKnown RBP12□□□□□ -0.49
NEDD9-210ENST00000505589 TRPV1Q8NER1 839 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 ACER1Q8TDN7 264 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
NEDD9-210ENST00000505589 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
NEDD9-210ENST00000505589 MAML3Q96JK9 1138 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 CCDC17Q96LX7 622 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 GAS2L1Q99501 681 aaPredicted RBP12□□□□□ -0.49
NEDD9-210ENST00000505589 PHF24Q9UPV7 400 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
NEDD9-210ENST00000505589 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
NEDD9-210ENST00000505589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
NEDD9-210ENST00000505589 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TRIM43BA6NCK2 446 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 MOXD2PA6NHM9 499 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TNFRSF10AO00220 468 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TRIM27P14373 513 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 AKR1A1P14550 325 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 SHMT1P34896 483 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 PLCD1P51178 756 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 SEPT2Q15019 361 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 SHROOM1Q2M3G4 852 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-210ENST00000505589 HSP90AB4PQ58FF6 505 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TRIM43Q96BQ3 446 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-210ENST00000505589 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TINF2Q9BSI4 451 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-210ENST00000505589 TTYH1Q9H313 450 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-210ENST00000505589 SPC25Q9HBM1 224 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 PIH1D3Q9NQM4 214 aaKnown RBP11.99□□□□□ -0.49
NEDD9-210ENST00000505589 MCM9Q9NXL9 1143 aa11.99□□□□□ -0.49
NEDD9-210ENST00000505589 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
NEDD9-210ENST00000505589 COBLO75128 1261 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 GABPAQ06546 454 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 ANKRD33Q7Z3H0 272 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 PCSK9Q8NBP7 692 aaKnown RBP11.98□□□□□ -0.49
NEDD9-210ENST00000505589 SLC44A5Q8NCS7 719 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 IL27Q8NEV9 243 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 MMP19Q99542 508 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 CCDC8Q9H0W5 538 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-210ENST00000505589 STARD7Q9NQZ5 370 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 TMX2Q9Y320 296 aa11.98□□□□□ -0.49
NEDD9-210ENST00000505589 TIMP1P01033 207 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.493e-9■□□□□ 9
NEDD9-210ENST00000505589 PRAMEF19Q5SWL8 479 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 RIOX2Q8IUF8 465 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 GLT1D1Q96MS3 346 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
NEDD9-210ENST00000505589 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 VCPKMTQ9H867 229 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 ATP8A2Q9NTI2 1148 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms