RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SLFNL1Q499Z3 407 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 C16orf86Q6ZW13 317 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 MB21D1Q8N884 522 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 BTBD7Q9P203 1132 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 TMX2Q9Y320 296 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 ICA1Q05084 483 aa23.99■■□□□ 1.43
UBE2D3-220ENST00000505307 WDR78Q5VTH9 848 aa23.99■■□□□ 1.43
UBE2D3-220ENST00000505307 TANGO6Q9C0B7 1094 aa23.99■■□□□ 1.43
UBE2D3-220ENST00000505307 HOXC6P09630 235 aa23.98■■□□□ 1.43
UBE2D3-220ENST00000505307 AKR1B1P15121 316 aa23.98■■□□□ 1.43
UBE2D3-220ENST00000505307 MFSD14CQ5VZR4 134 aa23.98■■□□□ 1.43
UBE2D3-220ENST00000505307 KBTBD3Q8NAB2 608 aa23.98■■□□□ 1.43
UBE2D3-220ENST00000505307 PUS7LQ9H0K6 701 aaKnown RBP23.98■■□□□ 1.43
UBE2D3-220ENST00000505307 ARPP21Q9UBL0 812 aaPredicted RBP23.98■■□□□ 1.43
UBE2D3-220ENST00000505307 STRNO43815 780 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 GRB14Q14449 540 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 CCL14Q16627 93 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 GIMAP6Q6P9H5 292 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 SHCBP1Q8NEM2 672 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 DIS3LQ8TF46 1054 aaKnown RBP23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 VCPKMTQ9H867 229 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 KANSL2Q9H9L4 492 aa23.97■■□□□ 1.43
UBE2D3-220ENST00000505307 TRIOBPQ9H2D6 2365 aa23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 MYH7P12883 1935 aa23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 ZFYP08048 801 aaPredicted RBP23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 LRRFIP1Q32MZ4 808 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 CTR9Q6PD62 1173 aa23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 SIAH1Q8IUQ4 282 aa23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 STRBPQ96SI9 672 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 C11orf49Q9H6J7 331 aa23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 RBM27Q9P2N5 1060 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-220ENST00000505307 CYP2D7A0A087X1C5 515 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 WDR46O15213 610 aaKnown RBP23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 CHGBP05060 677 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 DSG3P32926 999 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 MNX1P50219 401 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 ATP2B2Q01814 1243 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 SBK1Q52WX2 424 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 MOV10L1Q9BXT6 1211 aaKnown RBP23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 SPATC1LQ9H0A9 340 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 PRO3102Q9H379 93 aa23.95■■□□□ 1.42
UBE2D3-220ENST00000505307 BAZ2AQ9UIF9 1905 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-220ENST00000505307 A0A1W2PPC1 479 aa23.94■■□□□ 1.42
UBE2D3-220ENST00000505307 FLOT1O75955 427 aa23.94■■□□□ 1.42
UBE2D3-220ENST00000505307 APPBP2Q92624 585 aa23.94■■□□□ 1.42
UBE2D3-220ENST00000505307 MYH8P13535 1937 aa23.94■■□□□ 1.42
UBE2D3-220ENST00000505307 RNF113AO15541 343 aaKnown RBP23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 MSCO60682 206 aa23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 GNAT2P19087 354 aa23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 CCND3P30281 292 aaPredicted RBP23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 KIAA1755Q5JYT7 1200 aa23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 LHX8Q68G74 356 aa23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 MROH8Q9H579 483 aa23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 SLC5A4Q9NY91 659 aa23.93■■□□□ 1.42
UBE2D3-220ENST00000505307 TTC41PQ6P2S7 1318 aa23.92■■□□□ 1.42
UBE2D3-220ENST00000505307 ERC2O15083 957 aa23.92■■□□□ 1.42
UBE2D3-220ENST00000505307 EEF2P13639 858 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-220ENST00000505307 DPP9Q86TI2 863 aa23.92■■□□□ 1.42
UBE2D3-220ENST00000505307 ABRAQ8N0Z2 381 aa23.92■■□□□ 1.42
UBE2D3-220ENST00000505307 GOPCQ9HD26 462 aa23.92■■□□□ 1.42
UBE2D3-220ENST00000505307 GSG1L2A8MUP6 293 aa23.91■■□□□ 1.42
UBE2D3-220ENST00000505307 ERCC3P19447 782 aa23.91■■□□□ 1.42
UBE2D3-220ENST00000505307 CLEC10AQ8IUN9 316 aa23.91■■□□□ 1.42
UBE2D3-220ENST00000505307 SPICE1Q8N0Z3 855 aa23.91■■□□□ 1.42
UBE2D3-220ENST00000505307 OSBP2Q969R2 916 aa23.91■■□□□ 1.42
UBE2D3-220ENST00000505307 FLRT1Q9NZU1 646 aa23.91■■□□□ 1.42
UBE2D3-220ENST00000505307 SMIM22K7EJ46 135 aa23.9■■□□□ 1.42
UBE2D3-220ENST00000505307 ADORA2AP29274 412 aa23.9■■□□□ 1.42
UBE2D3-220ENST00000505307 OLFML2BQ68BL8 750 aa23.9■■□□□ 1.42
UBE2D3-220ENST00000505307 NPLOC4Q8TAT6 608 aa23.9■■□□□ 1.42
UBE2D3-220ENST00000505307 ZNF287Q9HBT7 754 aa23.9■■□□□ 1.42
UBE2D3-220ENST00000505307 SLC25A27O95847 323 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 IGHA2P01877 340 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 COL6A1P12109 1028 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 PLS1Q14651 629 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 ATG4CQ96DT6 458 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 MKNK2Q9HBH9 465 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 DDX20Q9UHI6 824 aaKnown RBP23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 ADAMTS5Q9UNA0 930 aa23.89■■□□□ 1.41
UBE2D3-220ENST00000505307 RLFQ13129 1914 aa23.88■■□□□ 1.41
UBE2D3-220ENST00000505307 GPAA1O43292 621 aa23.88■■□□□ 1.41
UBE2D3-220ENST00000505307 PCDHB15Q9Y5E8 787 aa23.88■■□□□ 1.41
UBE2D3-220ENST00000505307 ROBO3Q96MS0 1386 aa23.88■■□□□ 1.41
UBE2D3-220ENST00000505307 A0A0G2JMZ2 1700 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 PFASO15067 1338 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 ZNF236Q9UL36 1845 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 BMP8BP34820 402 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 TSHZ3Q63HK5 1081 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 NCAPG2Q86XI2 1143 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 NYAP2Q9P242 653 aa23.87■■□□□ 1.41
UBE2D3-220ENST00000505307 MINDY4BA8MYZ0 360 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 FCER1AP12319 257 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 RASA1P20936 1047 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 CNGA1P29973 690 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 CYP2C19P33261 490 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 COPB2P35606 906 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 TDO2P48775 406 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 NACAP1Q9BZK3 213 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms