RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 LMBR1LQ6UX01 489 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 TBC1D9Q6ZT07 1266 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 SAPCD2Q86UD0 394 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 DPF2Q92785 391 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 CLUAP1Q96AJ1 413 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 NIFKQ9BYG3 293 aaKnown RBP6.15□□□□□ -1.43
CDH9-203ENST00000505045 ENAMQ9NRM1 1142 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 CHMP3Q9Y3E7 222 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 OTOFQ9HC10 1997 aa6.15□□□□□ -1.43
CDH9-203ENST00000505045 ZNF804BA4D1E1 1349 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 AOX1Q06278 1338 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 E9PSI1 815 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 H7C1D1 291 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 AOC2O75106 756 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 ATP2B4P23634 1241 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 RPS12P25398 132 aaKnown RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 IGHMBP2P38935 993 aaKnown RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 ZNF280AP59817 542 aaPredicted RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 PODNQ7Z5L7 613 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 USP48Q86UV5 1035 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 ANKRD44Q8N8A2 993 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 C1orf216Q8TAB5 229 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 CAPNS2Q96L46 248 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 ZIC5Q96T25 663 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 PUS3Q9BZE2 481 aaKnown RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 ZNF358Q9NW07 568 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 JAG2Q9Y219 1238 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 PCDHAC2Q9Y5I4 1007 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 CASP8AP2Q9UKL3 1982 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 TNRC18O15417 2968 aaPredicted RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 WDR33Q9C0J8 1336 aaKnown RBP6.14□□□□□ -1.43
CDH9-203ENST00000505045 PAPPA2Q9BXP8 1791 aa6.14□□□□□ -1.43
CDH9-203ENST00000505045 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 SASH1O94885 1247 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 BCRP11274 1271 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 DEFB115Q30KQ5 88 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 ANGEL2Q5VTE6 544 aaKnown RBP6.13□□□□□ -1.43
CDH9-203ENST00000505045 KRT26Q7Z3Y9 468 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 DEPDC4Q8N2C3 294 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 CERS5Q8N5B7 392 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDH9-203ENST00000505045 KLHDC4Q8TBB5 520 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 MPHOSPH8Q99549 860 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 BICC1Q9H694 974 aaKnown RBP6.13□□□□□ -1.43
CDH9-203ENST00000505045 HCN2Q9UL51 889 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 UTYO14607 1347 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 SSC5DA1L4H1 1573 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 USP17L3A6NCW0 530 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 USP17L4A6NCW7 530 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 ATP9BO43861 1147 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 BNIP3LO60238 219 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 ALDH1L1O75891 902 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 MAP2K3P46734 347 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 IFIT5Q13325 482 aaKnown RBP6.13□□□□□ -1.43
CDH9-203ENST00000505045 NBPF9Q3BBW0 867 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 PRAMEF18Q5VWM3 479 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 CDC37L1Q7L3B6 337 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 USP17L1Q7RTZ2 530 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 NLRP8Q86W28 1048 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 MYOZ2Q9NPC6 264 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 ZDHHC3Q9NYG2 299 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 C9orf78Q9NZ63 289 aaPredicted RBP6.13□□□□□ -1.43
CDH9-203ENST00000505045 SCHIP1Q9P0W5 487 aaPredicted RBP6.13□□□□□ -1.43
CDH9-203ENST00000505045 ATXN7L1Q9ULK2 861 aaPredicted RBP6.13□□□□□ -1.43
CDH9-203ENST00000505045 PHF24Q9UPV7 400 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 KIAA1024Q9UPX6 916 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 TNNQ9UQP3 1299 aa6.13□□□□□ -1.43
CDH9-203ENST00000505045 COL1A1P02452 1464 aaPredicted RBP6.12□□□□□ -1.43
CDH9-203ENST00000505045 LAMB1P07942 1786 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 CCER2I3L3R5 266 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 C2CD2LO14523 706 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 BACH1O14867 736 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 DKK1O94907 266 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 LAMC2Q13753 1193 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 RABL6Q3YEC7 729 aaPredicted RBP6.12□□□□□ -1.43
CDH9-203ENST00000505045 LRRC24Q50LG9 513 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 EFHC2Q5JST6 749 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 USP17L2Q6R6M4 530 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 MOB2Q70IA6 237 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 KIAA0825Q8IV33 1275 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 PGBD3Q8N328 593 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 AGBL3Q8NEM8 1001 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 ZDHHC1Q8WTX9 485 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 CDCA5Q96FF9 252 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 COA1Q9GZY4 146 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 USP44Q9H0E7 712 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 CD209Q9NNX6 404 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 SMC4Q9NTJ3 1288 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 LEMD3Q9Y2U8 911 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 PTPRCP08575 1304 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 AKAP11Q9UKA4 1901 aa6.12□□□□□ -1.43
CDH9-203ENST00000505045 KRBA1A5PL33 1030 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 A6NJR5 290 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 FAM155AB1AL88 458 aaPredicted RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 WNT10BO00744 389 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 OIP5O43482 229 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 PLIN1O60240 522 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 HSPA8P11142 646 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms