RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 STAG1Q8WVM7 1258 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 MTA3Q9BTC8 594 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 ASCC2Q9H1I8 757 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-220ENST00000505005 EPB41L4AQ9HCS5 686 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-220ENST00000505005 TOMM22Q9NS69 142 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 PTPRFP10586 1907 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 RANBP6O60518 1105 aaKnown RBP11.63□□□□□ -0.55
NR1I3-220ENST00000505005 CYP2D6P10635 497 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 AKR1B1P15121 316 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
NR1I3-220ENST00000505005 MAPK4P31152 587 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 LACTBP83111 547 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-220ENST00000505005 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
NR1I3-220ENST00000505005 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 GMCL1P1Q8NEA9 526 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 CHURC1Q8WUH1 139 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
NR1I3-220ENST00000505005 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 MTMR4Q9NYA4 1195 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 MORF4L1Q9UBU8 362 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 CTDP1Q9Y5B0 961 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-220ENST00000505005 CASP8AP2Q9UKL3 1982 aa11.63□□□□□ -0.55
NR1I3-220ENST00000505005 LOC285556D6RIA3 1793 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 ERICH2A1L162 156 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 SGSM2O43147 1006 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 CDC45O75419 566 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 REC8O95072 547 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 FMNL1O95466 1100 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-220ENST00000505005 BCRP11274 1271 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
NR1I3-220ENST00000505005 VCAM1P19320 739 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 HERVK_113P62684 666 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 DGKHQ86XP1 1220 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
NR1I3-220ENST00000505005 TRIM17Q9Y577 477 aa11.62□□□□□ -0.55
NR1I3-220ENST00000505005 CYP2D7A0A087X1C5 515 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 STRNO43815 780 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 PLA2G6O60733 806 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 SLC25A27O95847 323 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 CHGBP05060 677 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-220ENST00000505005 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 PSMC4P43686 418 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 TRAF1Q13077 416 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 COL13A1Q5TAT6 717 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-220ENST00000505005 RALYLQ86SE5 291 aaKnown RBP11.61□□□□□ -0.55
NR1I3-220ENST00000505005 ZNF589Q86UQ0 364 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-220ENST00000505005 FAM160B2Q86V87 743 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 TMTC2Q8N394 836 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
NR1I3-220ENST00000505005 SLC44A5Q8NCS7 719 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 MAF1Q9H063 256 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 RPAP3Q9H6T3 665 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-220ENST00000505005 CLIP2Q9UDT6 1046 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 STX8Q9UNK0 236 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 PCNTO95613 3336 aa11.61□□□□□ -0.55
NR1I3-220ENST00000505005 IGKV6D-41A0A0C4DH26 115 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 F5H6K3 240 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 TNPO2O14787 897 aaKnown RBP11.6□□□□□ -0.55
NR1I3-220ENST00000505005 CYP2C8P10632 490 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 TOP1P11387 765 aaKnown RBP11.6□□□□□ -0.55
NR1I3-220ENST00000505005 OAZ1P54368 228 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 KLRC3Q07444 240 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 KRT32Q14532 448 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 TREML2Q5T2D2 321 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 VPS53Q5VIR6 699 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 SHCBP1Q8NEM2 672 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 NCOA7Q8NI08 942 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 MAP4K1Q92918 833 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 UBAC1Q9BSL1 405 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 MROH8Q9H579 483 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 CPA4Q9UI42 421 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 ADGRA2Q96PE1 1338 aa11.6□□□□□ -0.55
NR1I3-220ENST00000505005 ZBED4O75132 1171 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 FLOT1O75955 427 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
NR1I3-220ENST00000505005 DSG3P32926 999 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 SLC1A4P43007 532 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 ERVK-24P63145 666 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 UBXN2AP68543 259 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 IRF5Q13568 498 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 ZYXQ15942 572 aaKnown RBP11.59□□□□□ -0.55
NR1I3-220ENST00000505005 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
NR1I3-220ENST00000505005 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
NR1I3-220ENST00000505005 ANKRD13CQ8N6S4 541 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 CD99L2Q8TCZ2 262 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms