RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TNNQ9UQP3 1299 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 MYO5AQ9Y4I1 1855 aaKnown RBP8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 MYH1P12882 1939 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 MPHOSPH10O00566 681 aaKnown RBP8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 ERCC3P19447 782 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 ADCYAP1R1P41586 468 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 PRAMEF19Q5SWL8 479 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 NCAPG2Q86XI2 1143 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 MAGEB6Q8N7X4 407 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 FRAT1Q92837 279 aaPredicted RBP8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 MOV10L1Q9BXT6 1211 aaKnown RBP8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 TLR7Q9NYK1 1049 aaKnown RBP8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 RLFQ13129 1914 aa8.41□□□□□ -1.06
NPIPB3-203ENST00000504841 TRIM43BA6NCK2 446 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 SEPT4O43236 478 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 CT47B1P0C2W7 299 aaPredicted RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 RARSP54136 660 aaKnown RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 SMAD3P84022 425 aaKnown RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 TLE2Q04725 743 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 SEPT2Q15019 361 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 OLFML2BQ68BL8 750 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 TATDN1Q6P1N9 297 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 LBX2Q6XYB7 198 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 TTC6Q86TZ1 520 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 TRIM43Q96BQ3 446 aaPredicted RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 C1orf115Q9H7X2 142 aa8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 DBNLQ9UJU6 430 aaKnown RBP8.4□□□□□ -1.06
NPIPB3-203ENST00000504841 ZNF236Q9UL36 1845 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 C19orf67A6NJJ6 358 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 PQBP1O60828 265 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 COBLO75128 1261 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 SURF6O75683 361 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 BCAR3O75815 825 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 TRIM27P14373 513 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 GUCY1A2P33402 732 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 SHMT1P34896 483 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 PLCD1P51178 756 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 EPHB4P54760 987 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 EVX2Q03828 476 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 COG2Q14746 738 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 LRRC41Q15345 812 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 CLEC10AQ8IUN9 316 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 USP38Q8NB14 1042 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 PPM1EQ8WY54 764 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 SPATC1LQ9H0A9 340 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 EHD4Q9H223 541 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 GPR108Q9NPR9 543 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 XPNPEP3Q9NQH7 507 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 PLSCR2Q9NRY7 297 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 SLC5A4Q9NY91 659 aa8.39□□□□□ -1.07
NPIPB3-203ENST00000504841 NAV1Q8NEY1 1877 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 A0A1W2PRG0 241 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 STRNO43815 780 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 FLOT1O75955 427 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 PGK1P00558 417 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 CLTBP09497 229 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 RARBP10826 455 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 RAG1P15918 1043 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 ITGB8P26012 769 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 GRIN2CQ14957 1233 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 SNX17Q15036 470 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 TRMT2AQ8IZ69 625 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 SPICE1Q8N0Z3 855 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 SLC44A5Q8NCS7 719 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 ARHGAP45Q92619 1136 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 LENG1Q96BZ8 264 aaPredicted RBP8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 ATG4CQ96DT6 458 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 MAML3Q96JK9 1138 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 ANTXR1Q9H6X2 564 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 MCM9Q9NXL9 1143 aa8.38□□□□□ -1.07
NPIPB3-203ENST00000504841 A0A0G2JMZ2 1700 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 MAGEB6P1A0A0J9YX57 407 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 RAD21O60216 631 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 IGHA2P01877 340 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 PGK2P07205 417 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 CYP2D6P10635 497 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 FCER1AP12319 257 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 COL9A1P20849 921 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 DNAJB2P25686 324 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 FPGSQ05932 587 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 MAP3K12Q12852 859 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 TJAP1Q5JTD0 557 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 KIAA1755Q5JYT7 1200 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 RNF180Q86T96 592 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 CERS3Q8IU89 383 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 TMEM57Q8N5G2 664 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 SHCBP1Q8NEM2 672 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 ZNF512BQ96KM6 892 aaPredicted RBP8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 MMP19Q99542 508 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 HOXC10Q9NYD6 342 aa8.37□□□□□ -1.07
NPIPB3-203ENST00000504841 RAPGEFL1Q9UHV5 662 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms