RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 RAD9BQ6WBX8 426 aa15.16■□□□□ 0.02
SMTN-221ENST00000504335 NAF1Q96HR8 494 aaKnown RBP15.16■□□□□ 0.02
SMTN-221ENST00000504335 TRAPPC9Q96Q05 1148 aa15.16■□□□□ 0.02
SMTN-221ENST00000504335 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
SMTN-221ENST00000504335 GOLGA6L10A0A0M3HER8 536 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 C5orf60A6NFR6 353 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 EPHB4P54760 987 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 ANKRD20A3Q5VUR7 823 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 SESTD1Q86VW0 696 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 GSPT2Q8IYD1 628 aaKnown RBP15.15■□□□□ 0.02
SMTN-221ENST00000504335 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 SEC16BQ96JE7 1060 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 MTRQ99707 1265 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 FAM167BQ9BTA0 163 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 MBIPQ9NS73 344 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 CEMIPQ8WUJ3 1361 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 KBTBD12Q3ZCT8 623 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 CCDC92Q53HC0 331 aaPredicted RBP15.15■□□□□ 0.02
SMTN-221ENST00000504335 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
SMTN-221ENST00000504335 DMAP1Q9NPF5 467 aaPredicted RBP15.15■□□□□ 0.02
SMTN-221ENST00000504335 TMEM221A6NGB7 291 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 F8VZ95 297 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 CLTAP09496 248 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 TAF11Q15544 211 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 IFI16Q16666 785 aaKnown RBP15.14■□□□□ 0.01
SMTN-221ENST00000504335 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 SH2D3CQ8N5H7 860 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 PIDD1Q9HB75 910 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 CEP126Q9P2H0 1117 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 LEMD3Q9Y2U8 911 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 HMGB1P1B2RPK0 211 aaPredicted RBP15.14■□□□□ 0.01
SMTN-221ENST00000504335 NDUFA8P51970 172 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 HNRNPMP52272 730 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMTN-221ENST00000504335 PNMA8AQ86V59 439 aaPredicted RBP15.14■□□□□ 0.01
SMTN-221ENST00000504335 CAVIN3Q969G5 261 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 TEKT1Q969V4 418 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 FAM81BQ96LP2 452 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 MMS19Q96T76 1030 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 SLC12A5Q9H2X9 1139 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 C19orf44Q9H6X5 657 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 NEDD4P46934 1319 aa15.14■□□□□ 0.01
SMTN-221ENST00000504335 ZMYND10O75800 440 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 MBD4O95243 580 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 SESN3P58005 492 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 CMPK2Q5EBM0 449 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 RBM26Q5T8P6 1007 aaKnown RBP15.13■□□□□ 0.01
SMTN-221ENST00000504335 ARL10Q8N8L6 244 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 CNBD1Q8NA66 436 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 SLC35B4Q969S0 331 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 PCDHA7Q9UN72 937 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 SAR1BQ9Y6B6 198 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 TMEM62Q0P6H9 643 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 NECTIN1Q15223 517 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 GKAP1Q5VSY0 366 aaPredicted RBP15.13■□□□□ 0.01
SMTN-221ENST00000504335 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 PHC3Q8NDX5 983 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 SMCR8Q8TEV9 937 aaPredicted RBP15.13■□□□□ 0.01
SMTN-221ENST00000504335 PREBQ9HCU5 417 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 TRPV5Q9NQA5 729 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
SMTN-221ENST00000504335 MYO3AQ8NEV4 1616 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 TMCC1O94876 653 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 POLE2P56282 527 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 KCTD16Q68DU8 428 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 BLOC1S2Q6QNY1 142 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 CD302Q8IX05 232 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 PPP1R14BQ96C90 147 aa15.13■□□□□ 0.01
SMTN-221ENST00000504335 RBM33Q96EV2 1170 aaKnown RBP15.13■□□□□ 0.01
SMTN-221ENST00000504335 ABCC6O95255 1503 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 SPDYE5A6NIY4 337 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 PSMD14O00487 310 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 FLOT1O75955 427 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 GNAI2P04899 355 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 ATP2A2P16615 1042 aaKnown RBP15.12■□□□□ 0.01
SMTN-221ENST00000504335 ADAM9Q13443 819 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 PPFIBP1Q86W92 1011 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 VCXQ9H320 206 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 VCX3BQ9H321 246 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 VCX3AQ9NNX9 186 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 PPANQ9NQ55 473 aaKnown RBP15.12■□□□□ 0.01
SMTN-221ENST00000504335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMTN-221ENST00000504335 PAIP2BQ9ULR5 123 aaKnown RBP15.12■□□□□ 0.01
SMTN-221ENST00000504335 CEP131Q9UPN4 1083 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 PLCH2O75038 1416 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 TRAPPC3O43617 180 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 EVI5O60447 810 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 CCDC166P0CW27 439 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 ZFXP17010 805 aaPredicted RBP15.12■□□□□ 0.01
SMTN-221ENST00000504335 NLRP5P59047 1200 aa15.12■□□□□ 0.01
SMTN-221ENST00000504335 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
SMTN-221ENST00000504335 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
SMTN-221ENST00000504335 NFE2L2Q16236 605 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms