RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 ACRP10323 421 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 SPINK2P20155 84 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 ZYXQ15942 572 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 GNPTABQ3T906 1256 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 INTS3Q68E01 1043 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 GIMAP6Q6P9H5 292 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 VHLLQ6RSH7 139 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 C6orf15Q6UXA7 325 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 DEPDC7Q96QD5 511 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 PRDM5Q9NQX1 630 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 FAM86C1Q9NVL1 165 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 BSDC1Q9NW68 430 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 ZC3H7BQ9UGR2 993 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 PCDHB10Q9UN67 800 aa7.36□□□□□ -1.23
TRAPPC13-205ENST00000504243 TNFRSF10CO14798 259 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 CYP7A1P22680 504 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 IFRD2Q12894 506 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 SERINC3Q13530 473 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 FAM214BQ7L5A3 538 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 FAM178BQ8IXR5 827 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 SLFN12Q8IYM2 578 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 BAHD1Q8TBE0 780 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 NETO1Q8TDF5 533 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 MKL1Q969V6 931 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 COX4I2Q96KJ9 171 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 DHRS1Q96LJ7 313 aa7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 PHAXQ9H814 394 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 TPX2Q9ULW0 747 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-205ENST00000504243 GNAT3A8MTJ3 354 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 B2RBV5 119 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 RGS13O14921 159 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 GJB6O95452 261 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 PRNPP04156 253 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 ETV3P41162 512 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 OXCT1P55809 520 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 NBPF11Q86T75 865 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 MICAL1Q8TDZ2 1067 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 CYB5D2Q8WUJ1 264 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 MISP3Q96FF7 219 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 SNTG2Q9NY99 539 aa7.34□□□□□ -1.23
TRAPPC13-205ENST00000504243 LTBP3Q9NS15 1303 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 CLEC3AO75596 197 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 WNT11O96014 354 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 TP53P04637 393 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 CEACAM5P06731 702 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 IFI16Q16666 785 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 SFRP5Q5T4F7 317 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 KIAA1211LQ6NV74 962 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 C22orf34Q6ZV56 151 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 VSIG10LQ86VR7 867 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 STK11IPQ8N1F8 1099 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 SLC6A18Q96N87 628 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 ANGEL1Q9UNK9 670 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 CEP131Q9UPN4 1083 aa7.33□□□□□ -1.24
TRAPPC13-205ENST00000504243 TMEM265A0A087WTH1 108 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 FAM221BA6H8Z2 402 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 PDPK1O15530 556 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 NCAPHQ15003 741 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 BBS9Q3SYG4 887 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 TDRD10Q5VZ19 366 aaKnown RBP7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 FAM181AQ8N9Y4 354 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 RIN3Q8TB24 985 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 ZNF512BQ96KM6 892 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 CCDC113Q9H0I3 377 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 CCDC39Q9UFE4 941 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 SNX11Q9Y5W9 270 aa7.32□□□□□ -1.24
TRAPPC13-205ENST00000504243 CCNFP41002 786 aa7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 MTERF2Q49AM1 385 aa7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 CDH24Q86UP0 819 aa7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 TMEM192Q8IY95 271 aa7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 CCDC144CPQ8IYA2 1237 aa7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 PLD6Q8N2A8 252 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 MKRN2Q9H000 416 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 CWC22Q9HCG8 908 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 VAV3Q9UKW4 847 aa7.31□□□□□ -1.24
TRAPPC13-205ENST00000504243 TLDC2A0PJX2 215 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 UBOX5O94941 541 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 ZNF865P0CJ78 1059 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 ITIH2P19823 946 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 KIR3DL1P43629 444 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 PRKCQQ04759 706 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 RASA3Q14644 834 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 EEPD1Q7L9B9 569 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 FAM177A1Q8N128 213 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 PPP1R14AQ96A00 147 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 FBXL18Q96ME1 805 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 DNAJC7Q99615 494 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 SUCOQ9UBS9 1254 aaKnown RBP7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 PFDN2Q9UHV9 154 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 ZNF214Q9UL59 606 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 SLC5A6Q9Y289 635 aa7.3□□□□□ -1.24
TRAPPC13-205ENST00000504243 CLCN7P51798 805 aa7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 PMS1P54277 932 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 LRP10Q7Z4F1 713 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms