RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 ZKSCAN3Q9BRR0 538 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 UBAC1Q9BSL1 405 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 GREB1LQ9C091 1923 aaPredicted RBP21.42■■□□□ 1.02
DDR1-252ENST00000504152 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 SYNPO2Q9UMS6 1093 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 SLC45A1Q9Y2W3 748 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 FOXN1O15353 648 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 RAD21O60216 631 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 NOVP48745 357 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 DGKHQ86XP1 1220 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 RASEFQ8IZ41 740 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 NKX2-3Q8TAU0 364 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 LPAR1Q92633 364 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 KCNB2Q92953 911 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 ZSCAN10Q96SZ4 725 aaPredicted RBP21.41■■□□□ 1.02
DDR1-252ENST00000504152 PTPRFP10586 1907 aa21.41■■□□□ 1.02
DDR1-252ENST00000504152 ERICH2A1L162 156 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 F5H6K3 240 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 TOP1P11387 765 aaKnown RBP21.4■■□□□ 1.02
DDR1-252ENST00000504152 OSBPP22059 807 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 MCM5P33992 734 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 KLRC3Q07444 240 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 DGKZQ13574 1117 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 SART3Q15020 963 aaKnown RBP21.4■■□□□ 1.02
DDR1-252ENST00000504152 CYB5R4Q7L1T6 521 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 NEK1Q96PY6 1258 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 ZFYVE28Q9HCC9 887 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 SAGE1Q9NXZ1 904 aa21.4■■□□□ 1.02
DDR1-252ENST00000504152 USP17L15C9J2P7 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L13C9JLJ4 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L11C9JVI0 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L18D6R9N7 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L22D6RA61 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L17D6RBQ6 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L19D6RCP7 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L20D6RJB6 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 SEC24BO95487 1268 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
DDR1-252ENST00000504152 USP17L24Q0WX57 530 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 TAF1CQ15572 869 aaPredicted RBP21.39■■□□□ 1.01
DDR1-252ENST00000504152 TREML2Q5T2D2 321 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 ANKS1AQ92625 1134 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 MYH4Q9Y623 1939 aa21.39■■□□□ 1.01
DDR1-252ENST00000504152 IFIT3O14879 490 aaKnown RBP21.38■■□□□ 1.01
DDR1-252ENST00000504152 HMGB1P09429 215 aaKnown RBP21.38■■□□□ 1.01
DDR1-252ENST00000504152 MB21D2Q8IYB1 491 aaPredicted RBP21.38■■□□□ 1.01
DDR1-252ENST00000504152 SPICE1Q8N0Z3 855 aa21.38■■□□□ 1.01
DDR1-252ENST00000504152 TMEM47Q9BQJ4 181 aa21.38■■□□□ 1.01
DDR1-252ENST00000504152 TNKSO95271 1327 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
DDR1-252ENST00000504152 VCAM1P19320 739 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 CTCFP49711 727 aaPredicted RBP21.37■■□□□ 1.01
DDR1-252ENST00000504152 RCSD1Q6JBY9 416 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 CATSPERGQ6ZRH7 1159 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 CHST3Q7LGC8 479 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 LRRC47Q8N1G4 583 aaKnown RBP21.37■■□□□ 1.01
DDR1-252ENST00000504152 GMCL1P1Q8NEA9 526 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 MTA3Q9BTC8 594 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 CFHR5Q9BXR6 569 aa21.37■■□□□ 1.01
DDR1-252ENST00000504152 RPAP3Q9H6T3 665 aaPredicted RBP21.37■■□□□ 1.01
DDR1-252ENST00000504152 PRC1O43663 620 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 TBC1D8O95759 1140 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 PSMA5P28066 241 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 IRX3P78415 501 aaPredicted RBP21.36■■□□□ 1.01
DDR1-252ENST00000504152 ADCK5Q3MIX3 580 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 KIAA1755Q5JYT7 1200 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 IFIT1BQ5T764 474 aaKnown RBP21.36■■□□□ 1.01
DDR1-252ENST00000504152 SLFN13Q68D06 897 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 ENAHQ8N8S7 591 aaPredicted RBP21.36■■□□□ 1.01
DDR1-252ENST00000504152 PARK7Q99497 189 aaKnown RBP21.36■■□□□ 1.01
DDR1-252ENST00000504152 KAT14Q9H8E8 782 aa21.36■■□□□ 1.01
DDR1-252ENST00000504152 NDUFB10O96000 172 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 CRHR2Q13324 411 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 DHX32Q7L7V1 743 aaKnown RBP21.35■■□□□ 1.01
DDR1-252ENST00000504152 TMTC2Q8N394 836 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 TMEM87BQ96K49 555 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 JAKMIP1Q96N16 626 aaKnown RBP21.35■■□□□ 1.01
DDR1-252ENST00000504152 TANGO6Q9C0B7 1094 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 ASCC2Q9H1I8 757 aaPredicted RBP21.35■■□□□ 1.01
DDR1-252ENST00000504152 PRDM10Q9NQV6 1147 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 HOXC10Q9NYD6 342 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 LOC285556D6RIA3 1793 aa21.35■■□□□ 1.01
DDR1-252ENST00000504152 CYP2C8P10632 490 aa21.34■■□□□ 1.01
DDR1-252ENST00000504152 COG2Q14746 738 aa21.34■■□□□ 1.01
DDR1-252ENST00000504152 WTAPQ15007 396 aa21.34■■□□□ 1.01
DDR1-252ENST00000504152 SEC23AQ15436 765 aa21.34■■□□□ 1.01
DDR1-252ENST00000504152 TMEM67Q5HYA8 995 aa21.34■■□□□ 1.01
DDR1-252ENST00000504152 IGDCC4Q8TDY8 1250 aa21.34■■□□□ 1.01
DDR1-252ENST00000504152 SMCR8Q8TEV9 937 aaPredicted RBP21.34■■□□□ 1.01
DDR1-252ENST00000504152 P2RX7Q99572 595 aaKnown RBP21.34■■□□□ 1.01
DDR1-252ENST00000504152 TLR2O60603 784 aa21.33■■□□□ 1.01
DDR1-252ENST00000504152 SLC1A4P43007 532 aa21.33■■□□□ 1.01
DDR1-252ENST00000504152 ANTXR2P58335 489 aa21.33■■□□□ 1.01
DDR1-252ENST00000504152 ANAPC15P60006 121 aa21.33■■□□□ 1.01
DDR1-252ENST00000504152 FAM83BQ5T0W9 1011 aa21.33■■□□□ 1.01
DDR1-252ENST00000504152 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1.01
DDR1-252ENST00000504152 PNMA1Q8ND90 353 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms