RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 CLIP2Q9UDT6 1046 aa17.53■□□□□ 0.4
SGCA-204ENST00000504073 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
SGCA-204ENST00000504073 ZBTB21Q9ULJ3 1066 aa17.53■□□□□ 0.4
SGCA-204ENST00000504073 HPS5Q9UPZ3 1129 aa17.53■□□□□ 0.4
SGCA-204ENST00000504073 PTPDC1A2A3K4 754 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 GDF11O95390 407 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 XBP1P17861 261 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 TROAPQ12815 778 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 SEPT2Q15019 361 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 ASPRV1Q53RT3 343 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 NBPF12Q5TAG4 269 aaPredicted RBP17.52■□□□□ 0.4
SGCA-204ENST00000504073 CCDC144CPQ8IYA2 1237 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 MKL1Q969V6 931 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 GOPCQ9HD26 462 aa17.52■□□□□ 0.4
SGCA-204ENST00000504073 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 STK36Q9NRP7 1315 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 H3BQV1 296 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 IFNAR1P17181 557 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 RXRAP19793 462 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 LBX1P52954 281 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 TRIM29Q14134 588 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 GRM4Q14833 912 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 RGS22Q8NE09 1264 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 SMARCC2Q8TAQ2 1214 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 NCOA5Q9HCD5 579 aaKnown RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
SGCA-204ENST00000504073 GREB1LQ9C091 1923 aaPredicted RBP17.51■□□□□ 0.39
SGCA-204ENST00000504073 EEF2P13639 858 aaKnown RBP17.5■□□□□ 0.39
SGCA-204ENST00000504073 SMARCA1P28370 1054 aa17.5■□□□□ 0.39
SGCA-204ENST00000504073 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
SGCA-204ENST00000504073 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
SGCA-204ENST00000504073 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
SGCA-204ENST00000504073 RNF26Q9BY78 433 aaPredicted RBP17.5■□□□□ 0.39
SGCA-204ENST00000504073 ORC3Q9UBD5 711 aaPredicted RBP17.5■□□□□ 0.39
SGCA-204ENST00000504073 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 DEXIO95424 95 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 POTEIP0CG38 1075 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 POTEJP0CG39 1038 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
SGCA-204ENST00000504073 LDHDQ86WU2 507 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
SGCA-204ENST00000504073 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 WRNIP1Q96S55 665 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 FEZ1Q99689 392 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
SGCA-204ENST00000504073 CSADQ9Y600 493 aa17.49■□□□□ 0.39
SGCA-204ENST00000504073 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
SGCA-204ENST00000504073 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 STX6O43752 255 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 RAD21O60216 631 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
SGCA-204ENST00000504073 MLLT1Q03111 559 aaPredicted RBP17.48■□□□□ 0.39
SGCA-204ENST00000504073 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 TTLL12Q14166 644 aaPredicted RBP17.48■□□□□ 0.39
SGCA-204ENST00000504073 CCDC96Q2M329 555 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 ARMC9Q7Z3E5 817 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 SCYL3Q8IZE3 742 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 GMCL1P1Q8NEA9 526 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 MTMR7Q9Y216 660 aa17.48■□□□□ 0.39
SGCA-204ENST00000504073 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 CDC27P30260 824 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 SLC1A4P43007 532 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 VEGFBP49765 207 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 USP14P54578 494 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 CDAN1Q8IWY9 1227 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 CDCA5Q96FF9 252 aa17.47■□□□□ 0.39
SGCA-204ENST00000504073 SEC63Q9UGP8 760 aaKnown RBP17.47■□□□□ 0.39
SGCA-204ENST00000504073 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
SGCA-204ENST00000504073 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 PRPF3O43395 683 aaKnown RBP17.46■□□□□ 0.39
SGCA-204ENST00000504073 JAK2O60674 1132 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 PDHBP11177 359 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 DDIT3P35638 169 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 MAP3K9P80192 1104 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
SGCA-204ENST00000504073 NOL9Q5SY16 702 aaKnown RBP17.46■□□□□ 0.39
SGCA-204ENST00000504073 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 TMX2Q9Y320 296 aa17.46■□□□□ 0.39
SGCA-204ENST00000504073 ATAD5Q96QE3 1844 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 VPS37CA5D8V6 355 aaPredicted RBP17.45■□□□□ 0.38
SGCA-204ENST00000504073 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
SGCA-204ENST00000504073 UNCXA6NJT0 531 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 KLRF2D3W0D1 207 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 CTDNEP1O95476 244 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 SYT1P21579 422 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 TRAF1Q13077 416 aa17.45■□□□□ 0.38
SGCA-204ENST00000504073 NTRK3Q16288 839 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms