RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 KCNB1Q14721 858 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 ARID5BQ14865 1188 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC93Q567U6 631 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 PPP4R3BQ5MIZ7 849 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 TTC38Q5R3I4 469 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 UTP14CQ5TAP6 766 aaKnown RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 C12orf60Q5U649 245 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CDKAL1Q5VV42 579 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 TBC1D9BQ66K14 1250 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 PPFIBP1Q86W92 1011 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 NBPF5PQ86XG9 351 aaPredicted RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 DZIP1Q86YF9 867 aaKnown RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 HOMER1Q86YM7 354 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 LINC00116Q8NCU8 138 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 ANKRD20A12PQ8NF67 263 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC148Q8NFR7 591 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 NOC3LQ8WTT2 800 aaKnown RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC12Q8WUD4 166 aaPredicted RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 SDR42E1Q8WUS8 393 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF592Q92610 1267 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CELF1Q92879 486 aaKnown RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 ERCC4Q92889 916 aaPredicted RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 FAM163AQ96GL9 167 aaPredicted RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 ACSBG1Q96GR2 724 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 PAGE5Q96GU1 130 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 AK8Q96MA6 479 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 BAG1Q99933 345 aaPredicted RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CUEDC2Q9H467 287 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 KAT14Q9H8E8 782 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 MKRN1Q9UHC7 482 aaKnown RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 RWDD2AQ9UIY3 292 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 DDX41Q9UJV9 622 aaKnown RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 TAOK2Q9UL54 1235 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 PCDHA4Q9UN74 947 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.42□□□□□ -1.79e-7■□□□□ 8.5
ALYREF-201ENST00000504015 COL1A1P02452 1464 aaPredicted RBP4.42□□□□□ -1.7
ALYREF-201ENST00000504015 CNTNAP5Q8WYK1 1306 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 IRS2Q9Y4H2 1338 aa4.42□□□□□ -1.7
ALYREF-201ENST00000504015 TNRC6CQ9HCJ0 1690 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 BAZ2AQ9UIF9 1905 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 A0A087WWV3 80 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 USP27XA6NNY8 438 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 EFCAB8A8MWE9 144 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 AKR1B15C9JRZ8 316 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 H7C1D1 291 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 GTPBP6O43824 516 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 PLEKHA8P1O95397 391 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 LDHBP07195 334 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 TUBBP07437 444 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC175P0C221 793 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ATP1A3P13637 1013 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 FECHP22830 423 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 TM4SF1P30408 202 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 USP5P45974 858 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 DYNLL1P63167 89 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 GABPB1Q06547 395 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 PTGDRQ13258 359 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 GRAPQ13588 217 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 CUL4BQ13620 913 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 BMS1Q14692 1282 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 GRM4Q14833 912 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 NPY5RQ15761 445 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 E2F4Q16254 413 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF658Q5TYW1 1059 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 JAKMIP3Q5VZ66 844 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ISM2Q6H9L7 571 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 RCSD1Q6JBY9 416 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 TRIM65Q6PJ69 517 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 SYT10Q6XYQ8 523 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 DTHD1Q6ZMT9 781 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 TMC4Q7Z404 712 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF804AQ7Z570 1209 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 CNGA4Q8IV77 575 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 REXO1L1PQ8IX06 675 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 BLIDQ8IZY5 108 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF444Q8N0Y2 327 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 FNBP4Q8N3X1 1017 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC82Q8N4S0 544 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 SRBD1Q8N5C6 995 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF713Q8N859 430 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 TC2NQ8N9U0 490 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF784Q8NCA9 323 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 GRAPLQ8TC17 118 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 OXER1Q8TDS5 423 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF384Q8TF68 577 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 UBXN4Q92575 508 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 SYMPKQ92797 1274 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 FBXW7Q969H0 707 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC47Q96A33 483 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 DHX58Q96C10 678 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 IQCDQ96DY2 449 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 SPZ1Q9BXG8 430 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 CCSER1Q9C0I3 900 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ARGLU1Q9NWB6 273 aaPredicted RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 TRMT1Q9NXH9 659 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 VPS54Q9P1Q0 977 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 MYO1AQ9UBC5 1043 aa4.41□□□□□ -1.7
ALYREF-201ENST00000504015 ADD3Q9UEY8 706 aaKnown RBP4.41□□□□□ -1.7
ALYREF-201ENST00000504015 LIMA1Q9UHB6 759 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms