RNA–Protein interactions for RNA: ENST00000503823.5

SLIT2-202, Transcript of slit guidance ligand 2, humanhuman

TSL 1 (best) BASIC

Gene SLIT2, Length 5,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-202ENST00000503823 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
SLIT2-202ENST00000503823 ADD3Q9UEY8 706 aaKnown RBP13.72□□□□□ -0.21
SLIT2-202ENST00000503823 USP17L5A8MUK1 530 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 STRIP1Q5VSL9 837 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 C16orf45Q96MC5 204 aaPredicted RBP13.71□□□□□ -0.21
SLIT2-202ENST00000503823 COL5A2P05997 1499 aaPredicted RBP13.71□□□□□ -0.21
SLIT2-202ENST00000503823 KIF2AO00139 706 aaPredicted RBP13.71□□□□□ -0.21
SLIT2-202ENST00000503823 CASQ1P31415 396 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 SMTNP53814 917 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 HAUS3Q68CZ6 603 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 M0R2C6 588 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 NTSR2O95665 410 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 ZSCAN22P10073 491 aaPredicted RBP13.71□□□□□ -0.21
SLIT2-202ENST00000503823 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
SLIT2-202ENST00000503823 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
SLIT2-202ENST00000503823 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.21
SLIT2-202ENST00000503823 SLC16A2P36021 539 aa13.71□□□□□ -0.22
SLIT2-202ENST00000503823 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.22
SLIT2-202ENST00000503823 USP26Q9BXU7 913 aa13.71□□□□□ -0.22
SLIT2-202ENST00000503823 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.22
SLIT2-202ENST00000503823 MEGF6O75095 1541 aa13.71□□□□□ -0.22
SLIT2-202ENST00000503823 CYP2D7A0A087X1C5 515 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 STAT2P52630 851 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
SLIT2-202ENST00000503823 POLA2Q14181 598 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 MCAMP43121 646 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 SAMD7Q7Z3H4 446 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 GAS7O60861 476 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 IGBP1P78318 339 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 HS2ST1Q7LGA3 356 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 CD2APQ9Y5K6 639 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 STRN3Q13033 797 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 MIER3Q7Z3K6 550 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
SLIT2-202ENST00000503823 SPP2Q13103 211 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 YEATS4O95619 227 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 CDK8P49336 464 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 IFFO1Q0D2I5 559 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 TMC6Q7Z403 805 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 FAM84BQ96KN1 310 aaPredicted RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 AMNQ9BXJ7 453 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 CTAGE5O15320 804 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 PAFAH1B1P43034 410 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 RASA3Q14644 834 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 TAF1CQ15572 869 aaPredicted RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 ZMYM1Q5SVZ6 1142 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 TNS2Q63HR2 1409 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 FAM114A1Q8IWE2 563 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 VEGFAP15692 232 aaPredicted RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 MAP2K1Q02750 393 aaPredicted RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
SLIT2-202ENST00000503823 PUS7LQ9H0K6 701 aaKnown RBP13.69□□□□□ -0.22
SLIT2-202ENST00000503823 SPTLC2O15270 562 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 USO1O60763 962 aaKnown RBP13.68□□□□□ -0.22
SLIT2-202ENST00000503823 UBXN2AP68543 259 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 CBX1P83916 185 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 TMEM179Q6ZVK1 233 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 CDC37L1Q7L3B6 337 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
SLIT2-202ENST00000503823 DIS3L2Q8IYB7 885 aaKnown RBP13.68□□□□□ -0.22
SLIT2-202ENST00000503823 BCCIPQ9P287 314 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLIT2-202ENST00000503823 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 SCAF8Q9UPN6 1271 aaKnown RBP13.68□□□□□ -0.22
SLIT2-202ENST00000503823 EPHX2P34913 555 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 PRR16Q569H4 304 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 GOLGA6L10A0A0M3HER8 536 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 ZNF165P49910 485 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 CALCRLQ16602 461 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 Q3C1V9 767 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 SPECC1Q5M775 1068 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
SLIT2-202ENST00000503823 TMCO5BA8MYB1 307 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 USP17L10C9JJH3 530 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 MYOZ2Q9NPC6 264 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
SLIT2-202ENST00000503823 ASPRV1Q53RT3 343 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 BRAPQ7Z569 592 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.22
SLIT2-202ENST00000503823 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 FOXO4P98177 505 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 SYDE2Q5VT97 1194 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 POLR3GO15318 223 aaPredicted RBP13.67□□□□□ -0.22
SLIT2-202ENST00000503823 ECE1P42892 770 aa13.67□□□□□ -0.22
SLIT2-202ENST00000503823 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
SLIT2-202ENST00000503823 FASTKD5Q7L8L6 764 aaKnown RBP13.67□□□□□ -0.22
SLIT2-202ENST00000503823 TPH2Q8IWU9 490 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms