RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PLCG2P16885 1265 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 GTF2IP78347 998 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 GRM4Q14833 912 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 USP49Q70CQ1 688 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 PCDHA5Q9Y5H7 936 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 SRGNP10124 158 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 HMGB2P26583 209 aaKnown RBP25.76■■□□□ 1.71
PCDH1-204ENST00000503492 NLRP5P59047 1200 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 C16orf86Q6ZW13 317 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 SLF2Q8IX21 1173 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 SERTAD1Q9UHV2 236 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 MAD2L2Q9UI95 211 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 NRXN2Q9P2S2 1712 aa25.76■■□□□ 1.71
PCDH1-204ENST00000503492 ADAMTS3O15072 1205 aa25.75■■□□□ 1.71
PCDH1-204ENST00000503492 CDK8P49336 464 aa25.75■■□□□ 1.71
PCDH1-204ENST00000503492 OLFM4Q6UX06 510 aa25.75■■□□□ 1.71
PCDH1-204ENST00000503492 SNED1Q8TER0 1413 aa25.75■■□□□ 1.71
PCDH1-204ENST00000503492 PLSCR1O15162 318 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 CACTINQ8WUQ7 758 aaKnown RBP25.74■■□□□ 1.71
PCDH1-204ENST00000503492 TMEM47Q9BQJ4 181 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 SMTNL1A8MU46 457 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 TERF1P54274 439 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 ZNF174Q15697 407 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 SLC35G1Q2M3R5 365 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 TTC38Q5R3I4 469 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 COA1Q9GZY4 146 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 ZNF287Q9HBT7 754 aa25.74■■□□□ 1.71
PCDH1-204ENST00000503492 ANO8Q9HCE9 1232 aaPredicted RBP25.74■■□□□ 1.71
PCDH1-204ENST00000503492 STX8Q9UNK0 236 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 DAGLAQ9Y4D2 1042 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 MYH1P12882 1939 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 IKBKBO14920 756 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 NPR1P16066 1061 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 POSTNQ15063 836 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 PDILTQ8N807 584 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 EYA3Q99504 573 aa25.73■■□□□ 1.71
PCDH1-204ENST00000503492 ACTN4O43707 911 aaKnown RBP25.72■■□□□ 1.71
PCDH1-204ENST00000503492 BMP15O95972 392 aa25.72■■□□□ 1.71
PCDH1-204ENST00000503492 APBA3O96018 575 aa25.72■■□□□ 1.71
PCDH1-204ENST00000503492 PRR29P0C7W0 189 aa25.72■■□□□ 1.71
PCDH1-204ENST00000503492 PIK3AP1Q6ZUJ8 805 aa25.72■■□□□ 1.71
PCDH1-204ENST00000503492 HOOK1Q9UJC3 728 aaKnown RBP25.72■■□□□ 1.71
PCDH1-204ENST00000503492 BMP6P22004 513 aa25.71■■□□□ 1.71
PCDH1-204ENST00000503492 GNAQP50148 359 aa25.71■■□□□ 1.71
PCDH1-204ENST00000503492 DNTTIP2Q5QJE6 756 aaKnown RBP25.71■■□□□ 1.71
PCDH1-204ENST00000503492 GPKOWQ92917 476 aaPredicted RBP eCLIP25.71■■□□□ 1.71
PCDH1-204ENST00000503492 HSD3B7Q9H2F3 369 aa25.71■■□□□ 1.71
PCDH1-204ENST00000503492 MTMR7Q9Y216 660 aa25.71■■□□□ 1.71
PCDH1-204ENST00000503492 TPM2P07951 284 aa25.7■■□□□ 1.71
PCDH1-204ENST00000503492 NEDD1Q8NHV4 660 aa25.7■■□□□ 1.71
PCDH1-204ENST00000503492 FERMT2Q96AC1 680 aa25.7■■□□□ 1.71
PCDH1-204ENST00000503492 EPSTI1Q96J88 318 aa25.7■■□□□ 1.71
PCDH1-204ENST00000503492 CYTH3O43739 400 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 TPM4P67936 248 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 ARID5BQ14865 1188 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 GRAMD1CQ8IYS0 662 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 CERS5Q8N5B7 392 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 ZC3H12CQ9C0D7 883 aaKnown RBP25.7■■□□□ 1.7
PCDH1-204ENST00000503492 SH3GLB2Q9NR46 395 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 MAN1B1Q9UKM7 699 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 FOCADQ5VW36 1801 aa25.7■■□□□ 1.7
PCDH1-204ENST00000503492 A0A087X0B3 334 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 PALM3A6NDB9 673 aaPredicted RBP25.69■■□□□ 1.7
PCDH1-204ENST00000503492 ATP2C1P98194 919 aaPredicted RBP25.69■■□□□ 1.7
PCDH1-204ENST00000503492 NT5DC1Q5TFE4 455 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 LRRC8AQ8IWT6 810 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 XPO4Q9C0E2 1151 aaKnown RBP25.69■■□□□ 1.7
PCDH1-204ENST00000503492 IFNKQ9P0W0 207 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 MMP10P09238 476 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 CALML3P27482 149 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 LMOD1P29536 600 aaPredicted RBP25.69■■□□□ 1.7
PCDH1-204ENST00000503492 SARSP49591 514 aaKnown RBP25.69■■□□□ 1.7
PCDH1-204ENST00000503492 PTGDRQ13258 359 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 TYW1BQ6NUM6 668 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 BLIDQ8IZY5 108 aa25.69■■□□□ 1.7
PCDH1-204ENST00000503492 F8W031 263 aaPredicted RBP25.68■■□□□ 1.7
PCDH1-204ENST00000503492 TRAPPC10P48553 1259 aa25.68■■□□□ 1.7
PCDH1-204ENST00000503492 RASGRP2Q7LDG7 609 aa25.68■■□□□ 1.7
PCDH1-204ENST00000503492 FILIP1Q7Z7B0 1213 aa25.68■■□□□ 1.7
PCDH1-204ENST00000503492 COL11A2P13942 1736 aaPredicted RBP25.68■■□□□ 1.7
PCDH1-204ENST00000503492 ALDH1B1P30837 517 aa25.68■■□□□ 1.7
PCDH1-204ENST00000503492 MYL5Q02045 173 aa25.68■■□□□ 1.7
PCDH1-204ENST00000503492 SYMPKQ92797 1274 aaKnown RBP25.68■■□□□ 1.7
PCDH1-204ENST00000503492 SUGT1Q9Y2Z0 365 aa25.68■■□□□ 1.7
PCDH1-204ENST00000503492 SMC2O95347 1197 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 PDE6BP35913 854 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 DOK7Q18PE1 504 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 KANK3Q6NY19 840 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 DPP8Q6V1X1 898 aaPredicted RBP25.67■■□□□ 1.7
PCDH1-204ENST00000503492 PCDHA4Q9UN74 947 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 GOLGA8HP0CJ92 632 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 WWC2Q6AWC2 1192 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 SMARCE1Q969G3 411 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 DHX58Q96C10 678 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 MXD3Q9BW11 206 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 PARP3Q9Y6F1 533 aa25.67■■□□□ 1.7
PCDH1-204ENST00000503492 ATP1A3P13637 1013 aa25.66■■□□□ 1.7
PCDH1-204ENST00000503492 VWA3AA6NCI4 1184 aa25.66■■□□□ 1.7
PCDH1-204ENST00000503492 PICALMQ13492 652 aa25.66■■□□□ 1.7
PCDH1-204ENST00000503492 CEP95Q96GE4 821 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms