RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM86C2PA6NEL3 165 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 CLEC3AO75596 197 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 RNF4P78317 190 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 TNK2Q07912 1038 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 UNC5AQ6ZN44 842 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 DHRS1Q96LJ7 313 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 Q96M66 194 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 SLC6A18Q96N87 628 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 KCNH3Q9ULD8 1083 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
NIPBL-203ENST00000503274 PRNPP04156 253 aa9.17□□□□□ -0.94
NIPBL-203ENST00000503274 CLCN7P51798 805 aa9.17□□□□□ -0.94
NIPBL-203ENST00000503274 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
NIPBL-203ENST00000503274 NBPF12Q5TAG4 269 aaPredicted RBP9.17□□□□□ -0.94
NIPBL-203ENST00000503274 CDKAL1Q5VV42 579 aa9.17□□□□□ -0.94
NIPBL-203ENST00000503274 TTC6Q86TZ1 520 aa9.17□□□□□ -0.94
NIPBL-203ENST00000503274 C19orf47Q8N9M1 422 aaKnown RBP9.17□□□□□ -0.94
NIPBL-203ENST00000503274 PIWIL2Q8TC59 973 aaKnown RBP9.17□□□□□ -0.94
NIPBL-203ENST00000503274 MISP3Q96FF7 219 aa9.17□□□□□ -0.94
NIPBL-203ENST00000503274 CCDC180Q9P1Z9 1646 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 ABCC9O60706 1549 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 LRRN2O75325 713 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 PRKCQQ04759 706 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 PPP2R5EQ16537 467 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 STK11IPQ8N1F8 1099 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 FAM169BQ8N8A8 192 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 DTWD2Q8NBA8 298 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 HRASLS5Q96KN8 279 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 VAV3Q9UKW4 847 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 ST14Q9Y5Y6 855 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 SLC12A7Q9Y666 1083 aa9.16□□□□□ -0.94
NIPBL-203ENST00000503274 A0A1W2PQH9 124 aa9.15□□□□□ -0.94
NIPBL-203ENST00000503274 CASP7P55210 303 aa9.15□□□□□ -0.94
NIPBL-203ENST00000503274 AOC3Q16853 763 aa9.15□□□□□ -0.94
NIPBL-203ENST00000503274 VSIG10LQ86VR7 867 aa9.15□□□□□ -0.94
NIPBL-203ENST00000503274 ZNF512BQ96KM6 892 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-203ENST00000503274 HSPA12BQ96MM6 686 aa9.15□□□□□ -0.94
NIPBL-203ENST00000503274 SUCOQ9UBS9 1254 aaKnown RBP9.15□□□□□ -0.94
NIPBL-203ENST00000503274 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
NIPBL-203ENST00000503274 ETFBP38117 255 aa9.14□□□□□ -0.95
NIPBL-203ENST00000503274 PMS1P54277 932 aaKnown RBP9.14□□□□□ -0.95
NIPBL-203ENST00000503274 BCL7CQ8WUZ0 217 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-203ENST00000503274 ANGEL1Q9UNK9 670 aaKnown RBP9.14□□□□□ -0.95
NIPBL-203ENST00000503274 SLC5A6Q9Y289 635 aa9.14□□□□□ -0.95
NIPBL-203ENST00000503274 PITPNM2Q9BZ72 1349 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 LTBP3Q9NS15 1303 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 H3BS24 57 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 WNT11O96014 354 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 BNIP3Q12983 259 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 ASB11Q8WXH4 323 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 TANGO6Q9C0B7 1094 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 MKRN2Q9H000 416 aaKnown RBP9.13□□□□□ -0.95
NIPBL-203ENST00000503274 ZNF408Q9H9D4 720 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 SEMA3GQ9NS98 782 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 PRKAG3Q9UGI9 489 aa9.13□□□□□ -0.95
NIPBL-203ENST00000503274 SMAD7O15105 426 aaKnown RBP9.12□□□□□ -0.95
NIPBL-203ENST00000503274 TNNI3KQ59H18 835 aa9.12□□□□□ -0.95
NIPBL-203ENST00000503274 THAP5Q7Z6K1 395 aa9.12□□□□□ -0.95
NIPBL-203ENST00000503274 GPR62Q9BZJ7 368 aa9.12□□□□□ -0.95
NIPBL-203ENST00000503274 DUSP15Q9H1R2 295 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-203ENST00000503274 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-203ENST00000503274 C9IYK1 514 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 ADAMTS4O75173 837 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 SRFP11831 508 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 ATP2B1P20020 1258 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 BBS9Q3SYG4 887 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 FLCNQ8NFG4 579 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 TRIT1Q9H3H1 467 aaKnown RBP9.11□□□□□ -0.95
NIPBL-203ENST00000503274 PHAXQ9H814 394 aaKnown RBP9.11□□□□□ -0.95
NIPBL-203ENST00000503274 ZSWIM5Q9P217 1185 aa9.11□□□□□ -0.95
NIPBL-203ENST00000503274 TDRD10Q5VZ19 366 aaKnown RBP9.1□□□□□ -0.95
NIPBL-203ENST00000503274 SPRED2Q7Z698 418 aa9.1□□□□□ -0.95
NIPBL-203ENST00000503274 CCDC144CPQ8IYA2 1237 aa9.1□□□□□ -0.95
NIPBL-203ENST00000503274 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-203ENST00000503274 UBE2FQ969M7 185 aa9.1□□□□□ -0.95
NIPBL-203ENST00000503274 ASCC2Q9H1I8 757 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-203ENST00000503274 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
NIPBL-203ENST00000503274 CD96P40200 585 aa9.09□□□□□ -0.95
NIPBL-203ENST00000503274 AUHQ13825 339 aaKnown RBP9.09□□□□□ -0.95
NIPBL-203ENST00000503274 ZNF574Q6ZN55 896 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-203ENST00000503274 NFXL1Q6ZNB6 911 aa9.09□□□□□ -0.95
NIPBL-203ENST00000503274 PPFIBP1Q86W92 1011 aa9.09□□□□□ -0.95
NIPBL-203ENST00000503274 ATP13A1Q9HD20 1204 aa9.09□□□□□ -0.95
NIPBL-203ENST00000503274 ACTR10Q9NZ32 417 aa9.09□□□□□ -0.95
NIPBL-203ENST00000503274 TP53P04637 393 aaPredicted RBP9.08□□□□□ -0.96
NIPBL-203ENST00000503274 CD8BP10966 210 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 SF3A1Q15459 793 aaKnown RBP9.08□□□□□ -0.96
NIPBL-203ENST00000503274 CLEC16AQ2KHT3 1053 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 GNPTABQ3T906 1256 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 PRDM14Q9GZV8 571 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 PAK6Q9NQU5 681 aaPredicted RBP9.08□□□□□ -0.96
NIPBL-203ENST00000503274 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 PCDHB10Q9UN67 800 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 PCDHB12Q9Y5F1 795 aa9.08□□□□□ -0.96
NIPBL-203ENST00000503274 SHISA3A0PJX4 238 aa9.07□□□□□ -0.96
NIPBL-203ENST00000503274 STK10O94804 968 aaKnown RBP9.07□□□□□ -0.96
NIPBL-203ENST00000503274 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms