RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 MYH8P13535 1937 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 SNPHO15079 494 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
SNCA-207ENST00000502987 SHMT1P34896 483 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 CCNA1P78396 465 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 SIRT2Q8IXJ6 389 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
SNCA-207ENST00000502987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNCA-207ENST00000502987 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 TRIB2Q92519 343 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.33
SNCA-207ENST00000502987 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNCA-207ENST00000502987 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 PORCNQ9H237 461 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
SNCA-207ENST00000502987 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
SNCA-207ENST00000502987 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
SNCA-207ENST00000502987 RGS2P41220 211 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 SEPT2Q15019 361 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 CATSPERGQ6ZRH7 1159 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
SNCA-207ENST00000502987 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 KIAA1683Q9H0B3 1180 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
SNCA-207ENST00000502987 BAZ2AQ9UIF9 1905 aaKnown RBP12.94□□□□□ -0.34
SNCA-207ENST00000502987 MBD4O95243 580 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
SNCA-207ENST00000502987 VCAM1P19320 739 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 C12orf42Q96LP6 360 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 TANGO6Q9C0B7 1094 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
SNCA-207ENST00000502987 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
SNCA-207ENST00000502987 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
SNCA-207ENST00000502987 TCRBV5S4A2TA0A5A2 114 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 PRKAB2O43741 272 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 CYP2D6P10635 497 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 ATP5JP18859 108 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
SNCA-207ENST00000502987 MAP2K5Q13163 448 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 CCL14Q16627 93 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 SLFNL1Q499Z3 407 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 C7orf61Q8IZ16 206 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 TMEM121BQ9BXQ6 578 aaPredicted RBP12.93□□□□□ -0.34
SNCA-207ENST00000502987 LRRCC1Q9C099 1032 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 C11orf49Q9H6J7 331 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 ATP8A2Q9NTI2 1148 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 MYH7P12883 1935 aa12.93□□□□□ -0.34
SNCA-207ENST00000502987 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
SNCA-207ENST00000502987 CNGA1P29973 690 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 GUCY1A2P33402 732 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 ADD2P35612 726 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
SNCA-207ENST00000502987 MORN1Q5T089 497 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 MFSD14CQ5VZR4 134 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 ZSCAN25Q6NSZ9 544 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 APBA2Q99767 749 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 HAUS7Q99871 368 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 ARHGEF10LQ9HCE6 1279 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 HOXC10Q9NYD6 342 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 STAP2Q9UGK3 403 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
SNCA-207ENST00000502987 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
SNCA-207ENST00000502987 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 RAD21O60216 631 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 CNMDO75829 334 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 PTPREP23469 700 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
SNCA-207ENST00000502987 GABPAQ06546 454 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 PLS1Q14651 629 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 COG2Q14746 738 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 POTEEQ6S8J3 1075 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 USP6NLQ92738 828 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 OGDHLQ9ULD0 1010 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 ZMYND8Q9ULU4 1186 aaPredicted RBP12.91□□□□□ -0.34
SNCA-207ENST00000502987 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
SNCA-207ENST00000502987 CYP2D7A0A087X1C5 515 aa12.9□□□□□ -0.34
SNCA-207ENST00000502987 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
SNCA-207ENST00000502987 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
SNCA-207ENST00000502987 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
SNCA-207ENST00000502987 USP17L21D6R901 530 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms